Basic Information | |||
Gene ID | ENSGALG00000029057 | ||
Gene Name | VSX1 | ||
Full Name | Visual system homeobox 1 | ||
Organism | Gallus gallus [9031] |
Cross Reference | |||
UniProt | R4GMA7 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSGALP00000043363 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 18 | 84 | 3.50e-29 | Homeodomain-like |
ENSGALP00000043363 | Pfam | PF00046 | IPR001356 | 24 | 80 | 1.40e-23 | Homeobox domain |
ENSGALP00000043363 | ProSitePatterns | PS00027 | IPR017970 | 56 | 79 | - | Homeobox, conserved site |
ENSGALP00000043363 | ProSiteProfiles | PS50071 | IPR001356 | 21 | 81 | 0.00e-00 | Homeobox domain |
ENSGALP00000043363 | ProSiteProfiles | PS51496 | IPR023339 | 83 | 136 | 0.00e-00 | CVC domain |
ENSGALP00000043363 | SMART | SM00389 | IPR001356 | 23 | 85 | 1.20e-28 | Homeobox domain |
ENSGALP00000043363 | SUPERFAMILY | SSF46689 | IPR009057 | 11 | 82 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSGALP00000043363 | PF00046 | 6.5e-24 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSGALP00000043363 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSGALP00000043363 | GO:0007601 | biological_process | visual perception |
ENSGALP00000043363 | GO:0050896 | biological_process | response to stimulus |
ENSGALP00000043363 | GO:0060040 | biological_process | retinal bipolar neuron differentiation |
ENSGALP00000043363 | GO:0005634 | cellular_component | nucleus |
ENSGALP00000043363 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSGALP00000043363 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100160822 | 30195 | Bombus terrestris | 100650965 |
132113 | Bombus impatiens | 100748956 | 10029 | Cricetulus griseus | 100769470 |
34638 | Metaseiulus occidentalis | 100908603 | 9597 | Pan paniscus | 100991250 |
9555 | Papio anubis | 101026347 | 9685 | Felis catus | 101090343 |
9595 | Gorilla gorilla | 101124735 | 6087 | Hydra magnipapillata | 101235096 |
43179 | Ictidomys tridecemlineatus | 101961651 | 7897 | Latimeria chalumnae | 102355593 |
10090 | Mus musculus | 114889 | 6239 | Caenorhabditis elegans | 175811 |
9913 | Bos taurus | 286802 | 7227 | Drosophila melanogaster | 31469 |
28377 | Anolis carolinensis | ENSACAG00000013710 | 9358 | Choloepus hoffmanni | ENSCHOG00000002739 |
9361 | Dasypus novemcinctus | ENSDNOG00000002981 | 9796 | Equus caballus | ENSECAG00000003028 |
69293 | Gasterosteus aculeatus | ENSGACG00000012138 | 143995 | Megachile rotundata | 100883611 |
31033 | Takifugu rubripes | 101076798 | 9669 | Mustela putorius furo | 101675354 |
9598 | Pan troglodytes | 741063 | 9365 | Erinaceus europaeus | ENSEEUG00000004886 |
13735 | Pelodiscus sinensis | ENSPSIG00000003555 | 9305 | Sarcophilus harrisii | ENSSHAG00000017959 |
59729 | Taeniopygia guttata | ENSTGUG00000005139 | 9739 | Tursiops truncatus | ENSTTRG00000001632 |
8049 | Gadus morhua | ENSGMOG00000017612 | 9785 | Loxodonta africana | ENSLAFG00000018392 |
9315 | Macropus eugenii | ENSMEUG00000003138 | 9103 | Meleagris gallopavo | ENSMGAG00000007153 |
30608 | Microcebus murinus | ENSMICG00000002047 | 59463 | Myotis lucifugus | ENSMLUG00000007341 |
9544 | Macaca mulatta | ENSMMUG00000020600 | 9258 | Ornithorhynchus anatinus | ENSOANG00000006497 |
9986 | Oryctolagus cuniculus | ENSOCUG00000017055 | 30611 | Otolemur garnettii | ENSOGAG00000008500 |
8128 | Oreochromis niloticus | ENSONIG00000007081 | 9978 | Ochotona princeps | ENSOPRG00000001494 |
42254 | Sorex araneus | ENSSARG00000013745 | 9823 | Sus scrofa | ENSSSCG00000023887 |
37347 | Tupaia belangeri | ENSTBEG00000014757 | 99883 | Tetraodon nigroviridis | ENSTNIG00000013369 |
Paralogs | |||
395536 |