Basic Information | |||
Gene ID | 172893 | ||
Gene Name | lin-11; ZC247.3 | ||
Full Name | Protein lin-11 | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | P20154 | UniGene | Cel.18452 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_ZC247.3 | UCSC | ZC247.3 |
Protein Interactions | |
DIP | NULL |
IntAct | P20154 |
MINT | NULL |
STRING | 6239.ZC247.3 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ZC247.3 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 229 | 298 | 1.60e-23 | Homeodomain-like |
ZC247.3 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 131 | 184 | 2.30e-13 | Zinc finger, LIM-type |
ZC247.3 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 67 | 130 | 2.00e-14 | Zinc finger, LIM-type |
ZC247.3 | Pfam | PF00046 | IPR001356 | 242 | 298 | 1.40e-19 | Homeobox domain |
ZC247.3 | Pfam | PF00412 | IPR001781 | 127 | 184 | 3.00e-16 | Zinc finger, LIM-type |
ZC247.3 | Pfam | PF00412 | IPR001781 | 68 | 122 | 4.40e-14 | Zinc finger, LIM-type |
ZC247.3 | ProSitePatterns | PS00027 | IPR017970 | 274 | 297 | - | Homeobox, conserved site |
ZC247.3 | ProSitePatterns | PS00478 | IPR001781 | 127 | 162 | - | Zinc finger, LIM-type |
ZC247.3 | ProSitePatterns | PS00478 | IPR001781 | 68 | 102 | - | Zinc finger, LIM-type |
ZC247.3 | ProSiteProfiles | PS50023 | IPR001781 | 126 | 188 | 0.00e-00 | Zinc finger, LIM-type |
ZC247.3 | ProSiteProfiles | PS50023 | IPR001781 | 66 | 125 | 0.00e-00 | Zinc finger, LIM-type |
ZC247.3 | ProSiteProfiles | PS50071 | IPR001356 | 239 | 299 | 0.00e-00 | Homeobox domain |
ZC247.3 | SMART | SM00132 | IPR001781 | 126 | 181 | 1.10e-17 | Zinc finger, LIM-type |
ZC247.3 | SMART | SM00132 | IPR001781 | 67 | 118 | 5.10e-17 | Zinc finger, LIM-type |
ZC247.3 | SMART | SM00389 | IPR001356 | 241 | 303 | 1.80e-24 | Homeobox domain |
ZC247.3 | SUPERFAMILY | SSF46689 | IPR009057 | 234 | 302 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ZC247.3 | PF00412 | 7.2e-31 | LIM | LIM domain |
ZC247.3 | PF00046 | 6.3e-20 | Homeobox | Homeobox domain |
ZC247.3 | PF05920 | 1.6e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ZC247.3 | GO:0001655 | biological_process | urogenital system development |
ZC247.3 | GO:0001657 | biological_process | ureteric bud development |
ZC247.3 | GO:0001702 | biological_process | gastrulation with mouth forming second |
ZC247.3 | GO:0001705 | biological_process | ectoderm formation |
ZC247.3 | GO:0001706 | biological_process | endoderm formation |
ZC247.3 | GO:0001822 | biological_process | kidney development |
ZC247.3 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
ZC247.3 | GO:0007267 | biological_process | cell-cell signaling |
ZC247.3 | GO:0007389 | biological_process | pattern specification process |
ZC247.3 | GO:0007399 | biological_process | nervous system development |
ZC247.3 | GO:0008045 | biological_process | motor neuron axon guidance |
ZC247.3 | GO:0009653 | biological_process | anatomical structure morphogenesis |
ZC247.3 | GO:0009791 | biological_process | post-embryonic development |
ZC247.3 | GO:0009880 | biological_process | embryonic pattern specification |
ZC247.3 | GO:0009948 | biological_process | anterior/posterior axis specification |
ZC247.3 | GO:0009952 | biological_process | anterior/posterior pattern specification |
ZC247.3 | GO:0009953 | biological_process | dorsal/ventral pattern formation |
ZC247.3 | GO:0010468 | biological_process | regulation of gene expression |
ZC247.3 | GO:0010842 | biological_process | retina layer formation |
ZC247.3 | GO:0021527 | biological_process | spinal cord association neuron differentiation |
ZC247.3 | GO:0021549 | biological_process | cerebellum development |
ZC247.3 | GO:0021702 | biological_process | cerebellar Purkinje cell differentiation |
ZC247.3 | GO:0021871 | biological_process | forebrain regionalization |
ZC247.3 | GO:0021937 | biological_process | cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation |
ZC247.3 | GO:0035846 | biological_process | oviduct epithelium development |
ZC247.3 | GO:0035847 | biological_process | uterine epithelium development |
ZC247.3 | GO:0040019 | biological_process | positive regulation of embryonic development |
ZC247.3 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
ZC247.3 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ZC247.3 | GO:0048646 | biological_process | anatomical structure formation involved in morphogenesis |
ZC247.3 | GO:0048703 | biological_process | embryonic viscerocranium morphogenesis |
ZC247.3 | GO:0060059 | biological_process | embryonic retina morphogenesis in camera-type eye |
ZC247.3 | GO:0060067 | biological_process | cervix development |
ZC247.3 | GO:0060068 | biological_process | vagina development |
ZC247.3 | GO:0060322 | biological_process | head development |
ZC247.3 | GO:0060429 | biological_process | epithelium development |
ZC247.3 | GO:0061205 | biological_process | paramesonephric duct development |
ZC247.3 | GO:0072049 | biological_process | comma-shaped body morphogenesis |
ZC247.3 | GO:0072050 | biological_process | S-shaped body morphogenesis |
ZC247.3 | GO:0072077 | biological_process | renal vesicle morphogenesis |
ZC247.3 | GO:0072178 | biological_process | nephric duct morphogenesis |
ZC247.3 | GO:0090009 | biological_process | primitive streak formation |
ZC247.3 | GO:0090190 | biological_process | positive regulation of branching involved in ureteric bud morphogenesis |
ZC247.3 | GO:0097477 | biological_process | lateral motor column neuron migration |
ZC247.3 | GO:2000543 | biological_process | positive regulation of gastrulation |
ZC247.3 | GO:2000744 | biological_process | positive regulation of anterior head development |
ZC247.3 | GO:2000768 | biological_process | positive regulation of nephron tubule epithelial cell differentiation |
ZC247.3 | GO:0005634 | cellular_component | nucleus |
ZC247.3 | GO:0043234 | cellular_component | protein complex |
ZC247.3 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ZC247.3 | GO:0003714 | molecular_function | transcription corepressor activity |
ZC247.3 | GO:0008270 | molecular_function | zinc ion binding |
ZC247.3 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100116733 | 9601 | Pongo abelii | 100451412 |
34638 | Metaseiulus occidentalis | 100904816 | 30611 | Otolemur garnettii | 100951554 |
9597 | Pan paniscus | 100988029 | 9555 | Papio anubis | 101008593 |
8083 | Xiphophorus maculatus | 102218401 | 13616 | Monodelphis domestica | 100028420 |
7029 | Acyrthosiphon pisum | 100158984 | 9483 | Callithrix jacchus | 100392549 |
9823 | Sus scrofa | 100513681 | 30195 | Bombus terrestris | 100644955 |
9785 | Loxodonta africana | 100675956 | 10029 | Cricetulus griseus | 100758453 |
9615 | Canis familiaris | 100856649 | 9305 | Sarcophilus harrisii | 100931234 |
39432 | Saimiri boliviensis | 101033157 | 31033 | Takifugu rubripes | 101061689 |
9685 | Felis catus | 101083467 | 9595 | Gorilla gorilla | 101135759 |
8090 | Oryzias latipes | 101166400 | 9669 | Mustela putorius furo | 101687390 |
43179 | Ictidomys tridecemlineatus | 101973608 | 7897 | Latimeria chalumnae | 102362985 |
59463 | Myotis lucifugus | 102440821 | 13735 | Pelodiscus sinensis | 102453882 |
10116 | Rattus norvegicus | 257634 | 7955 | Danio rerio | 30465 |
7227 | Drosophila melanogaster | 31813 | 7668 | Strongylocentrotus purpuratus | 373522 |
8364 | Xenopus tropicalis | 548836 | 9606 | Homo sapiens | 64211 |
7070 | Tribolium castaneum | 657972 | 9913 | Bos taurus | 786041 |
9358 | Choloepus hoffmanni | ENSCHOG00000007567 | 10141 | Cavia porcellus | ENSCPOG00000023977 |
9361 | Dasypus novemcinctus | ENSDNOG00000010448 | 9796 | Equus caballus | ENSECAG00000016915 |
9365 | Erinaceus europaeus | ENSEEUG00000002834 | 9371 | Echinops telfairi | ENSETEG00000003513 |
69293 | Gasterosteus aculeatus | ENSGACG00000013605 | 9031 | Gallus gallus | ENSGALG00000005409 |
9544 | Macaca mulatta | ENSMMUG00000021668 | 61853 | Nomascus leucogenys | ENSNLEG00000002343 |
9258 | Ornithorhynchus anatinus | ENSOANG00000014248 | 9986 | Oryctolagus cuniculus | ENSOCUG00000024664 |
9813 | Procavia capensis | ENSPCAG00000010694 | 132908 | Pteropus vampyrus | ENSPVAG00000015637 |
37347 | Tupaia belangeri | ENSTBEG00000007734 | 59729 | Taeniopygia guttata | ENSTGUG00000008052 |
99883 | Tetraodon nigroviridis | ENSTNIG00000013489 | 9739 | Tursiops truncatus | ENSTTRG00000008900 |
28377 | Anolis carolinensis | ENSACAG00000005037 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000008305 |
10020 | Dipodomys ordii | ENSDORG00000006956 | 8049 | Gadus morhua | ENSGMOG00000002984 |
9315 | Macropus eugenii | ENSMEUG00000006658 | 9598 | Pan troglodytes | ENSPTRG00000009050 |
42254 | Sorex araneus | ENSSARG00000010593 | 9478 | Tarsius syrichta | ENSTSYG00000001931 |