Basic Information | |||
Gene ID | 31813 | ||
Gene Name | Lim1; CG11354, Dmel_CG11354 | ||
Full Name | Lim1, isoform B | ||
Organism | Drosophila melanogaster [7227] |
Cross Reference | |||
UniProt | M9PJE4 | UniGene | Dm.3025 |
PDB | NULL | OMIM | NULL |
KEGG | dme:Dmel_CG11354 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
FBpp0071216 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 231 | 304 | 1.70e-23 | Homeodomain-like |
FBpp0071216 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 25 | 88 | 7.30e-17 | Zinc finger, LIM-type |
FBpp0071216 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 89 | 141 | 1.40e-13 | Zinc finger, LIM-type |
FBpp0071216 | Pfam | PF00046 | IPR001356 | 248 | 304 | 1.80e-19 | Homeobox domain |
FBpp0071216 | Pfam | PF00412 | IPR001781 | 27 | 81 | 2.50e-15 | Zinc finger, LIM-type |
FBpp0071216 | Pfam | PF00412 | IPR001781 | 86 | 142 | 9.00e-16 | Zinc finger, LIM-type |
FBpp0071216 | ProSitePatterns | PS00027 | IPR017970 | 280 | 303 | - | Homeobox, conserved site |
FBpp0071216 | ProSitePatterns | PS00478 | IPR001781 | 27 | 61 | - | Zinc finger, LIM-type |
FBpp0071216 | ProSitePatterns | PS00478 | IPR001781 | 86 | 121 | - | Zinc finger, LIM-type |
FBpp0071216 | ProSiteProfiles | PS50023 | IPR001781 | 25 | 84 | 0.00e-00 | Zinc finger, LIM-type |
FBpp0071216 | ProSiteProfiles | PS50023 | IPR001781 | 85 | 147 | 0.00e-00 | Zinc finger, LIM-type |
FBpp0071216 | ProSiteProfiles | PS50071 | IPR001356 | 245 | 305 | 0.00e-00 | Homeobox domain |
FBpp0071216 | SMART | SM00132 | IPR001781 | 26 | 77 | 1.30e-19 | Zinc finger, LIM-type |
FBpp0071216 | SMART | SM00132 | IPR001781 | 85 | 140 | 1.30e-18 | Zinc finger, LIM-type |
FBpp0071216 | SMART | SM00389 | IPR001356 | 247 | 309 | 3.00e-24 | Homeobox domain |
FBpp0071216 | SUPERFAMILY | SSF46689 | IPR009057 | 241 | 310 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
FBpp0071216 | PF00412 | 1.5e-31 | LIM | LIM domain |
FBpp0071216 | PF00046 | 9.4e-20 | Homeobox | Homeobox domain |
FBpp0071216 | PF05920 | 1.6e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
FBpp0071216 | GO:0001655 | biological_process | urogenital system development |
FBpp0071216 | GO:0001657 | biological_process | ureteric bud development |
FBpp0071216 | GO:0001702 | biological_process | gastrulation with mouth forming second |
FBpp0071216 | GO:0001705 | biological_process | ectoderm formation |
FBpp0071216 | GO:0001706 | biological_process | endoderm formation |
FBpp0071216 | GO:0001822 | biological_process | kidney development |
FBpp0071216 | GO:0006351 | biological_process | transcription, DNA-templated |
FBpp0071216 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
FBpp0071216 | GO:0007267 | biological_process | cell-cell signaling |
FBpp0071216 | GO:0007389 | biological_process | pattern specification process |
FBpp0071216 | GO:0007399 | biological_process | nervous system development |
FBpp0071216 | GO:0008045 | biological_process | motor neuron axon guidance |
FBpp0071216 | GO:0009653 | biological_process | anatomical structure morphogenesis |
FBpp0071216 | GO:0009791 | biological_process | post-embryonic development |
FBpp0071216 | GO:0009880 | biological_process | embryonic pattern specification |
FBpp0071216 | GO:0009948 | biological_process | anterior/posterior axis specification |
FBpp0071216 | GO:0009952 | biological_process | anterior/posterior pattern specification |
FBpp0071216 | GO:0009953 | biological_process | dorsal/ventral pattern formation |
FBpp0071216 | GO:0010468 | biological_process | regulation of gene expression |
FBpp0071216 | GO:0010842 | biological_process | retina layer formation |
FBpp0071216 | GO:0021527 | biological_process | spinal cord association neuron differentiation |
FBpp0071216 | GO:0021549 | biological_process | cerebellum development |
FBpp0071216 | GO:0021702 | biological_process | cerebellar Purkinje cell differentiation |
FBpp0071216 | GO:0021871 | biological_process | forebrain regionalization |
FBpp0071216 | GO:0021937 | biological_process | cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation |
FBpp0071216 | GO:0035846 | biological_process | oviduct epithelium development |
FBpp0071216 | GO:0035847 | biological_process | uterine epithelium development |
FBpp0071216 | GO:0040019 | biological_process | positive regulation of embryonic development |
FBpp0071216 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
FBpp0071216 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
FBpp0071216 | GO:0048646 | biological_process | anatomical structure formation involved in morphogenesis |
FBpp0071216 | GO:0048703 | biological_process | embryonic viscerocranium morphogenesis |
FBpp0071216 | GO:0060059 | biological_process | embryonic retina morphogenesis in camera-type eye |
FBpp0071216 | GO:0060067 | biological_process | cervix development |
FBpp0071216 | GO:0060068 | biological_process | vagina development |
FBpp0071216 | GO:0060322 | biological_process | head development |
FBpp0071216 | GO:0060429 | biological_process | epithelium development |
FBpp0071216 | GO:0061205 | biological_process | paramesonephric duct development |
FBpp0071216 | GO:0072049 | biological_process | comma-shaped body morphogenesis |
FBpp0071216 | GO:0072050 | biological_process | S-shaped body morphogenesis |
FBpp0071216 | GO:0072077 | biological_process | renal vesicle morphogenesis |
FBpp0071216 | GO:0072178 | biological_process | nephric duct morphogenesis |
FBpp0071216 | GO:0090009 | biological_process | primitive streak formation |
FBpp0071216 | GO:0090190 | biological_process | positive regulation of branching involved in ureteric bud morphogenesis |
FBpp0071216 | GO:0097477 | biological_process | lateral motor column neuron migration |
FBpp0071216 | GO:2000543 | biological_process | positive regulation of gastrulation |
FBpp0071216 | GO:2000744 | biological_process | positive regulation of anterior head development |
FBpp0071216 | GO:2000768 | biological_process | positive regulation of nephron tubule epithelial cell differentiation |
FBpp0071216 | GO:0005634 | cellular_component | nucleus |
FBpp0071216 | GO:0043234 | cellular_component | protein complex |
FBpp0071216 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
FBpp0071216 | GO:0003714 | molecular_function | transcription corepressor activity |
FBpp0071216 | GO:0008270 | molecular_function | zinc ion binding |
FBpp0071216 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100028420 | 7425 | Nasonia vitripennis | 100116733 |
7029 | Acyrthosiphon pisum | 100158984 | 10224 | Saccoglossus kowalevskii | 100366515 |
9483 | Callithrix jacchus | 100392549 | 9601 | Pongo abelii | 100451412 |
9785 | Loxodonta africana | 100675956 | 143995 | Megachile rotundata | 100882468 |
34638 | Metaseiulus occidentalis | 100904816 | 9305 | Sarcophilus harrisii | 100931234 |
30611 | Otolemur garnettii | 100951554 | 9597 | Pan paniscus | 100988029 |
9555 | Papio anubis | 101008593 | 8083 | Xiphophorus maculatus | 102218401 |
6239 | Caenorhabditis elegans | 172893 | 7955 | Danio rerio | 30465 |
9823 | Sus scrofa | 100513681 | 400682 | Amphimedon queenslandica | 100633432 |
30195 | Bombus terrestris | 100644955 | 132113 | Bombus impatiens | 100741244 |
10029 | Cricetulus griseus | 100758453 | 9615 | Canis familiaris | 100856649 |
39432 | Saimiri boliviensis | 101033157 | 31033 | Takifugu rubripes | 101061689 |
9685 | Felis catus | 101083467 | 9595 | Gorilla gorilla | 101135759 |
8090 | Oryzias latipes | 101166400 | 9669 | Mustela putorius furo | 101687390 |
43179 | Ictidomys tridecemlineatus | 101973608 | 7897 | Latimeria chalumnae | 102362985 |
59463 | Myotis lucifugus | 102440821 | 13735 | Pelodiscus sinensis | 102453882 |
10116 | Rattus norvegicus | 257634 | 7668 | Strongylocentrotus purpuratus | 373522 |
8364 | Xenopus tropicalis | 548836 | 9606 | Homo sapiens | 64211 |
7070 | Tribolium castaneum | 657972 | 9913 | Bos taurus | 786041 |
7719 | Ciona intestinalis | ENSCING00000019733 | 9365 | Erinaceus europaeus | ENSEEUG00000002834 |
9371 | Echinops telfairi | ENSETEG00000003513 | 61853 | Nomascus leucogenys | ENSNLEG00000002343 |
9986 | Oryctolagus cuniculus | ENSOCUG00000024664 | 9978 | Ochotona princeps | ENSOPRG00000004641 |
9813 | Procavia capensis | ENSPCAG00000010694 | 37347 | Tupaia belangeri | ENSTBEG00000007734 |
59729 | Taeniopygia guttata | ENSTGUG00000008052 | 9739 | Tursiops truncatus | ENSTTRG00000008900 |
28377 | Anolis carolinensis | ENSACAG00000005037 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000008305 |
9358 | Choloepus hoffmanni | ENSCHOG00000007567 | 10141 | Cavia porcellus | ENSCPOG00000023977 |
51511 | Ciona savignyi | ENSCSAVG00000004922 | 9361 | Dasypus novemcinctus | ENSDNOG00000010448 |
10020 | Dipodomys ordii | ENSDORG00000006956 | 9796 | Equus caballus | ENSECAG00000016915 |
69293 | Gasterosteus aculeatus | ENSGACG00000013605 | 9031 | Gallus gallus | ENSGALG00000005409 |
8049 | Gadus morhua | ENSGMOG00000002984 | 9315 | Macropus eugenii | ENSMEUG00000006658 |
9103 | Meleagris gallopavo | ENSMGAG00000007924 | 9544 | Macaca mulatta | ENSMMUG00000021668 |
9258 | Ornithorhynchus anatinus | ENSOANG00000014248 | 7757 | Petromyzon marinus | ENSPMAG00000008904 |
9598 | Pan troglodytes | ENSPTRG00000009050 | 132908 | Pteropus vampyrus | ENSPVAG00000015637 |
42254 | Sorex araneus | ENSSARG00000010593 | 99883 | Tetraodon nigroviridis | ENSTNIG00000014399 |