Basic Information
Gene ID 30465
Gene Name lhx5; lim5
Full Name LIM/homeobox protein Lhx5
Organism Danio rerio [7955]

Cross Reference
UniProt P52889 UniGene Dr.75068
PDB NULL OMIM NULL
KEGG dre:30465 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000075139

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000075139 Gene3D G3DSA:1.10.10.60 IPR009057 183 240 3.60e-23 Homeodomain-like
ENSDARP00000075139 Gene3D G3DSA:2.10.110.10 IPR001781 3 66 7.80e-17 Zinc finger, LIM-type
ENSDARP00000075139 Gene3D G3DSA:2.10.110.10 IPR001781 67 120 1.50e-14 Zinc finger, LIM-type
ENSDARP00000075139 Pfam PF00046 IPR001356 181 237 3.50e-19 Homeobox domain
ENSDARP00000075139 Pfam PF00412 IPR001781 5 60 4.10e-15 Zinc finger, LIM-type
ENSDARP00000075139 Pfam PF00412 IPR001781 64 121 3.70e-17 Zinc finger, LIM-type
ENSDARP00000075139 ProSitePatterns PS00027 IPR017970 213 236 - Homeobox, conserved site
ENSDARP00000075139 ProSitePatterns PS00478 IPR001781 5 39 - Zinc finger, LIM-type
ENSDARP00000075139 ProSitePatterns PS00478 IPR001781 64 99 - Zinc finger, LIM-type
ENSDARP00000075139 ProSiteProfiles PS50023 IPR001781 3 62 0.00e-00 Zinc finger, LIM-type
ENSDARP00000075139 ProSiteProfiles PS50023 IPR001781 63 125 0.00e-00 Zinc finger, LIM-type
ENSDARP00000075139 ProSiteProfiles PS50071 IPR001356 178 238 0.00e-00 Homeobox domain
ENSDARP00000075139 SMART SM00132 IPR001781 4 55 2.40e-18 Zinc finger, LIM-type
ENSDARP00000075139 SMART SM00132 IPR001781 63 118 6.00e-20 Zinc finger, LIM-type
ENSDARP00000075139 SMART SM00389 IPR001356 180 242 2.60e-24 Homeobox domain
ENSDARP00000075139 SUPERFAMILY SSF46689 IPR009057 163 239 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000075139 PF00412 7.7e-33 LIM LIM domain
ENSDARP00000075139 PF00046 1.5e-19 Homeobox Homeobox domain
ENSDARP00000075139 PF05920 1.5e-05 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000075139 GO:0005634 cellular_component nucleus
ENSDARP00000075139 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSDARP00000075139 GO:0008270 molecular_function zinc ion binding
ENSDARP00000075139 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100116733 9601 Pongo abelii 100451412
34638 Metaseiulus occidentalis 100904816 9305 Sarcophilus harrisii 100931234
30611 Otolemur garnettii 100951554 9597 Pan paniscus 100988571
39432 Saimiri boliviensis 101029480 43179 Ictidomys tridecemlineatus 101963559
8083 Xiphophorus maculatus 102218401 7897 Latimeria chalumnae 102363675
6239 Caenorhabditis elegans 172893 13616 Monodelphis domestica 100028420
7029 Acyrthosiphon pisum 100158984 9986 Oryctolagus cuniculus 100356586
9483 Callithrix jacchus 100395248 30195 Bombus terrestris 100644955
9785 Loxodonta africana 100657099 132113 Bombus impatiens 100741244
10029 Cricetulus griseus 100768655 9615 Canis familiaris 100856649
9555 Papio anubis 101016716 9685 Felis catus 101083467
9595 Gorilla gorilla 101135725 8090 Oryzias latipes 101166400
9669 Mustela putorius furo 101685089 59463 Myotis lucifugus 102440821
10116 Rattus norvegicus 257634 7227 Drosophila melanogaster 31813
7668 Strongylocentrotus purpuratus 373522 8364 Xenopus tropicalis 548836
9606 Homo sapiens 64211 7070 Tribolium castaneum 657972
9913 Bos taurus 786041 9361 Dasypus novemcinctus ENSDNOG00000010448
9365 Erinaceus europaeus ENSEEUG00000002834 9371 Echinops telfairi ENSETEG00000003513
9031 Gallus gallus ENSGALG00000005409 8049 Gadus morhua ENSGMOG00000014888
30608 Microcebus murinus ENSMICG00000006473 61853 Nomascus leucogenys ENSNLEG00000002343
9258 Ornithorhynchus anatinus ENSOANG00000014248 9978 Ochotona princeps ENSOPRG00000009362
9813 Procavia capensis ENSPCAG00000010694 13735 Pelodiscus sinensis ENSPSIG00000005953
37347 Tupaia belangeri ENSTBEG00000003770 59729 Taeniopygia guttata ENSTGUG00000008052
99883 Tetraodon nigroviridis ENSTNIG00000013489 9739 Tursiops truncatus ENSTTRG00000008900
9544 Macaca mulatta 713417 28377 Anolis carolinensis ENSACAG00000005037
9646 Ailuropoda melanoleuca ENSAMEG00000008592 9358 Choloepus hoffmanni ENSCHOG00000007567
10141 Cavia porcellus ENSCPOG00000023977 10020 Dipodomys ordii ENSDORG00000006956
9796 Equus caballus ENSECAG00000016915 69293 Gasterosteus aculeatus ENSGACG00000013605
9315 Macropus eugenii ENSMEUG00000006658 9103 Meleagris gallopavo ENSMGAG00000007924
7757 Petromyzon marinus ENSPMAG00000008904 9598 Pan troglodytes ENSPTRG00000009050
132908 Pteropus vampyrus ENSPVAG00000015637 42254 Sorex araneus ENSSARG00000010593
9823 Sus scrofa ENSSSCG00000009869 31033 Takifugu rubripes ENSTRUG00000018387