Basic Information
Gene ID 418065
Gene Name PRDM4
Full Name PR domain zinc finger protein 4
Organism Gallus gallus [9031]

Cross Reference
UniProt F1NYH0 UniGene Gga.54784
PDB NULL OMIM NULL
KEGG gga:418065 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 591 621 1.10e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 622 643 1.60e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 644 667 3.00e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 668 696 6.40e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 697 723 6.10e-10 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Gene3D G3DSA:3.30.160.60 IPR013087 724 753 5.30e-08 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000020571 Pfam PF00096 IPR007087 732 754 2.00e-03 Zinc finger, C2H2
ENSGALP00000020571 PIRSF PIRSF037161 IPR017124 1 801 0.00e-00 PR-domain zinc finger protein PRDM4
ENSGALP00000020571 ProSitePatterns PS00028 IPR007087 594 614 - Zinc finger, C2H2
ENSGALP00000020571 ProSitePatterns PS00028 IPR007087 622 642 - Zinc finger, C2H2
ENSGALP00000020571 ProSitePatterns PS00028 IPR007087 650 670 - Zinc finger, C2H2
ENSGALP00000020571 ProSitePatterns PS00028 IPR007087 678 698 - Zinc finger, C2H2
ENSGALP00000020571 ProSitePatterns PS00028 IPR007087 706 726 - Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 592 619 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 620 647 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 648 675 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 676 703 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 704 731 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50157 IPR007087 732 759 0.00e-00 Zinc finger, C2H2
ENSGALP00000020571 ProSiteProfiles PS50280 IPR001214 414 531 0.00e-00 SET domain
ENSGALP00000020571 SMART SM00317 IPR001214 414 537 1.20e-03 SET domain
ENSGALP00000020571 SMART SM00355 IPR015880 547 568 1.70e-01 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 592 614 1.30e-03 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 620 642 7.50e-07 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 648 670 2.70e-07 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 676 698 3.20e-05 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 704 726 1.10e-04 Zinc finger, C2H2-like
ENSGALP00000020571 SMART SM00355 IPR015880 732 752 6.20e-02 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSGALP00000020571 PF13465 8.1e-28 zf-H2C2_2 Zinc-finger double domain
ENSGALP00000020571 PF00096 5.2e-21 zf-C2H2 Zinc finger, C2H2 type
ENSGALP00000020571 PF13894 2.1e-16 zf-C2H2_4 C2H2-type zinc finger
ENSGALP00000020571 PF12874 9.4e-07 zf-met Zinc-finger of C2H2 type
ENSGALP00000020571 PF12171 0.00028 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSGALP00000020571 GO:0006351 biological_process transcription, DNA-templated
ENSGALP00000020571 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSGALP00000020571 GO:0005634 cellular_component nucleus
ENSGALP00000020571 GO:0003677 molecular_function DNA binding
ENSGALP00000020571 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9597 Pan paniscus 100967318 400682 Amphimedon queenslandica 100631787
10029 Cricetulus griseus 100762237 7668 Strongylocentrotus purpuratus 100891124
9555 Papio anubis 101003895 39432 Saimiri boliviensis 101039712
9685 Felis catus 101089949 7897 Latimeria chalumnae 102361561
10116 Rattus norvegicus 170820 9544 Macaca mulatta 704529
28377 Anolis carolinensis ENSACAG00000014907 9646 Ailuropoda melanoleuca ENSAMEG00000016174
9358 Choloepus hoffmanni ENSCHOG00000001744 10020 Dipodomys ordii ENSDORG00000015081
9365 Erinaceus europaeus ENSEEUG00000006569 9371 Echinops telfairi ENSETEG00000008915
69293 Gasterosteus aculeatus ENSGACG00000018950 9595 Gorilla gorilla ENSGGOG00000001244
8049 Gadus morhua ENSGMOG00000001979 9315 Macropus eugenii ENSMEUG00000004495
9103 Meleagris gallopavo ENSMGAG00000012815 30608 Microcebus murinus ENSMICG00000007807
59463 Myotis lucifugus ENSMLUG00000000767 13616 Monodelphis domestica ENSMODG00000001448
9669 Mustela putorius furo ENSMPUG00000012238 30611 Otolemur garnettii ENSOGAG00000011945
9978 Ochotona princeps ENSOPRG00000010192 8090 Oryzias latipes ENSORLG00000011007
9813 Procavia capensis ENSPCAG00000009987 13735 Pelodiscus sinensis ENSPSIG00000012066
42254 Sorex araneus ENSSARG00000013107 9823 Sus scrofa ENSSSCG00000000160
43179 Ictidomys tridecemlineatus ENSSTOG00000016168 37347 Tupaia belangeri ENSTBEG00000001732
99883 Tetraodon nigroviridis ENSTNIG00000018531 31033 Takifugu rubripes ENSTRUG00000006971
9739 Tursiops truncatus ENSTTRG00000011056 30538 Vicugna pacos ENSVPAG00000002215
8083 Xiphophorus maculatus ENSXMAG00000004286 9913 Bos taurus ENSBTAG00000012999
10141 Cavia porcellus ENSCPOG00000022385 9785 Loxodonta africana ENSLAFG00000001483
7757 Petromyzon marinus ENSPMAG00000003609 9598 Pan troglodytes ENSPTRG00000005400
132908 Pteropus vampyrus ENSPVAG00000001596 59729 Taeniopygia guttata ENSTGUG00000010962
9478 Tarsius syrichta ENSTSYG00000009248 8364 Xenopus tropicalis ENSXETG00000011529