Basic Information | |||
Gene ID | ENSSTOG00000016168 | ||
Gene Name | PRDM4 | ||
Full Name | PR domain zinc finger protein 4 | ||
Organism | Ictidomys tridecemlineatus [43179] |
Cross Reference | |||
UniProt | I3MR13 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 592 | 622 | 1.10e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 623 | 644 | 1.50e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 645 | 668 | 5.20e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 669 | 696 | 6.90e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 697 | 724 | 1.90e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 725 | 754 | 5.80e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000014476 | Pfam | PF00096 | IPR007087 | 733 | 755 | 1.60e-03 | Zinc finger, C2H2 |
ENSSTOP00000014476 | PIRSF | PIRSF037161 | IPR017124 | 1 | 804 | 0.00e-00 | PR-domain zinc finger protein PRDM4 |
ENSSTOP00000014476 | ProSitePatterns | PS00028 | IPR007087 | 595 | 615 | - | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSitePatterns | PS00028 | IPR007087 | 623 | 643 | - | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSitePatterns | PS00028 | IPR007087 | 651 | 671 | - | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSitePatterns | PS00028 | IPR007087 | 679 | 699 | - | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSitePatterns | PS00028 | IPR007087 | 707 | 727 | - | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 593 | 620 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 621 | 648 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 649 | 676 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 677 | 704 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 705 | 732 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50157 | IPR007087 | 733 | 760 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000014476 | ProSiteProfiles | PS50280 | IPR001214 | 408 | 532 | 0.00e-00 | SET domain |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 548 | 569 | 2.60e-01 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 593 | 615 | 1.30e-03 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 621 | 643 | 7.50e-07 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 649 | 671 | 2.70e-07 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 677 | 699 | 1.20e-05 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 705 | 727 | 1.10e-04 | Zinc finger, C2H2-like |
ENSSTOP00000014476 | SMART | SM00355 | IPR015880 | 733 | 753 | 6.20e-02 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSTOP00000014476 | PF13465 | 9e-29 | zf-H2C2_2 | Zinc-finger double domain |
ENSSTOP00000014476 | PF00096 | 4.3e-22 | zf-C2H2 | Zinc finger, C2H2 type |
ENSSTOP00000014476 | PF13894 | 2e-15 | zf-C2H2_4 | C2H2-type zinc finger |
ENSSTOP00000014476 | PF12874 | 1.1e-08 | zf-met | Zinc-finger of C2H2 type |
ENSSTOP00000014476 | PF12171 | 9.1e-05 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSTOP00000014476 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSSTOP00000014476 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSTOP00000014476 | GO:0005634 | cellular_component | nucleus |
ENSSTOP00000014476 | GO:0003677 | molecular_function | DNA binding |
ENSSTOP00000014476 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10029 | Cricetulus griseus | 100762237 | 7668 | Strongylocentrotus purpuratus | 100891124 |
9597 | Pan paniscus | 100967318 | 39432 | Saimiri boliviensis | 101039712 |
7897 | Latimeria chalumnae | 102361561 | 9031 | Gallus gallus | 418065 |
9913 | Bos taurus | ENSBTAG00000012999 | 10141 | Cavia porcellus | ENSCPOG00000022385 |
69293 | Gasterosteus aculeatus | ENSGACG00000018950 | 9785 | Loxodonta africana | ENSLAFG00000001483 |
9103 | Meleagris gallopavo | ENSMGAG00000012815 | 13616 | Monodelphis domestica | ENSMODG00000001448 |
30611 | Otolemur garnettii | ENSOGAG00000011945 | 8090 | Oryzias latipes | ENSORLG00000011007 |
7757 | Petromyzon marinus | ENSPMAG00000003609 | 9598 | Pan troglodytes | ENSPTRG00000005400 |
132908 | Pteropus vampyrus | ENSPVAG00000001596 | 400682 | Amphimedon queenslandica | 100631787 |
9555 | Papio anubis | 101003895 | 9685 | Felis catus | 101089949 |
10116 | Rattus norvegicus | 170820 | 9544 | Macaca mulatta | 704529 |
28377 | Anolis carolinensis | ENSACAG00000014907 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000016174 |
9358 | Choloepus hoffmanni | ENSCHOG00000001744 | 10020 | Dipodomys ordii | ENSDORG00000015081 |
9365 | Erinaceus europaeus | ENSEEUG00000006569 | 9371 | Echinops telfairi | ENSETEG00000008915 |
9595 | Gorilla gorilla | ENSGGOG00000001244 | 8049 | Gadus morhua | ENSGMOG00000001979 |
9315 | Macropus eugenii | ENSMEUG00000004495 | 30608 | Microcebus murinus | ENSMICG00000007807 |
59463 | Myotis lucifugus | ENSMLUG00000000767 | 9669 | Mustela putorius furo | ENSMPUG00000012238 |
9978 | Ochotona princeps | ENSOPRG00000010192 | 9813 | Procavia capensis | ENSPCAG00000009987 |
13735 | Pelodiscus sinensis | ENSPSIG00000012066 | 42254 | Sorex araneus | ENSSARG00000013107 |
9823 | Sus scrofa | ENSSSCG00000000160 | 37347 | Tupaia belangeri | ENSTBEG00000001732 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018531 | 9739 | Tursiops truncatus | ENSTTRG00000011056 |
30538 | Vicugna pacos | ENSVPAG00000002215 | 59729 | Taeniopygia guttata | ENSTGUG00000010962 |
31033 | Takifugu rubripes | ENSTRUG00000006971 | 9478 | Tarsius syrichta | ENSTSYG00000009248 |
8364 | Xenopus tropicalis | ENSXETG00000011529 | 8083 | Xiphophorus maculatus | ENSXMAG00000004286 |