Basic Information | |||
Gene ID | ENSPSIG00000012066 | ||
Gene Name | PRDM4 | ||
Full Name | Uncharacterized protein | ||
Organism | Pelodiscus sinensis [13735] |
Cross Reference | |||
UniProt | K7FZG4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 436 | 466 | 8.60e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 467 | 488 | 1.20e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 489 | 512 | 1.70e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 513 | 541 | 1.10e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 542 | 568 | 3.80e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 569 | 598 | 4.10e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPSIP00000013424 | Pfam | PF00096 | IPR007087 | 577 | 599 | 1.90e-03 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSitePatterns | PS00028 | IPR007087 | 439 | 459 | - | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSitePatterns | PS00028 | IPR007087 | 467 | 487 | - | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSitePatterns | PS00028 | IPR007087 | 495 | 515 | - | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSitePatterns | PS00028 | IPR007087 | 523 | 543 | - | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSitePatterns | PS00028 | IPR007087 | 551 | 571 | - | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 437 | 464 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 465 | 492 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 493 | 520 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 521 | 548 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 549 | 576 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50157 | IPR007087 | 577 | 604 | 0.00e-00 | Zinc finger, C2H2 |
ENSPSIP00000013424 | ProSiteProfiles | PS50280 | IPR001214 | 259 | 376 | 0.00e-00 | SET domain |
ENSPSIP00000013424 | SMART | SM00317 | IPR001214 | 259 | 382 | 7.90e-04 | SET domain |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 392 | 413 | 1.90e-01 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 437 | 459 | 1.30e-03 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 465 | 487 | 7.50e-07 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 493 | 515 | 4.10e-06 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 521 | 543 | 2.10e-05 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 549 | 571 | 4.00e-04 | Zinc finger, C2H2-like |
ENSPSIP00000013424 | SMART | SM00355 | IPR015880 | 577 | 597 | 5.20e-02 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSPSIP00000013424 | PF13465 | 9e-26 | zf-H2C2_2 | Zinc-finger double domain |
ENSPSIP00000013424 | PF00096 | 2.6e-20 | zf-C2H2 | Zinc finger, C2H2 type |
ENSPSIP00000013424 | PF13894 | 3.1e-17 | zf-C2H2_4 | C2H2-type zinc finger |
ENSPSIP00000013424 | PF12171 | 4e-06 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSPSIP00000013424 | PF12874 | 6.7e-06 | zf-met | Zinc-finger of C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSPSIP00000013424 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSPSIP00000013424 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSPSIP00000013424 | GO:0005634 | cellular_component | nucleus |
ENSPSIP00000013424 | GO:0003677 | molecular_function | DNA binding |
ENSPSIP00000013424 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
400682 | Amphimedon queenslandica | 100631787 | 10029 | Cricetulus griseus | 100762237 |
7668 | Strongylocentrotus purpuratus | 100891124 | 9597 | Pan paniscus | 100967318 |
9555 | Papio anubis | 101003895 | 39432 | Saimiri boliviensis | 101039712 |
9685 | Felis catus | 101089949 | 7897 | Latimeria chalumnae | 102361561 |
9031 | Gallus gallus | 418065 | 28377 | Anolis carolinensis | ENSACAG00000014907 |
9913 | Bos taurus | ENSBTAG00000012999 | 9358 | Choloepus hoffmanni | ENSCHOG00000001744 |
10141 | Cavia porcellus | ENSCPOG00000022385 | 10020 | Dipodomys ordii | ENSDORG00000015081 |
9365 | Erinaceus europaeus | ENSEEUG00000006569 | 9371 | Echinops telfairi | ENSETEG00000008915 |
69293 | Gasterosteus aculeatus | ENSGACG00000018950 | 9595 | Gorilla gorilla | ENSGGOG00000001244 |
9785 | Loxodonta africana | ENSLAFG00000001483 | 9103 | Meleagris gallopavo | ENSMGAG00000012815 |
13616 | Monodelphis domestica | ENSMODG00000001448 | 9669 | Mustela putorius furo | ENSMPUG00000012238 |
30611 | Otolemur garnettii | ENSOGAG00000011945 | 8090 | Oryzias latipes | ENSORLG00000011007 |
9813 | Procavia capensis | ENSPCAG00000009987 | 7757 | Petromyzon marinus | ENSPMAG00000003609 |
10116 | Rattus norvegicus | 170820 | 9544 | Macaca mulatta | 704529 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000016174 | 8049 | Gadus morhua | ENSGMOG00000001979 |
9315 | Macropus eugenii | ENSMEUG00000004495 | 30608 | Microcebus murinus | ENSMICG00000007807 |
59463 | Myotis lucifugus | ENSMLUG00000000767 | 9978 | Ochotona princeps | ENSOPRG00000010192 |
42254 | Sorex araneus | ENSSARG00000013107 | 37347 | Tupaia belangeri | ENSTBEG00000001732 |
9739 | Tursiops truncatus | ENSTTRG00000011056 | 9598 | Pan troglodytes | ENSPTRG00000005400 |
132908 | Pteropus vampyrus | ENSPVAG00000001596 | 9823 | Sus scrofa | ENSSSCG00000000160 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000016168 | 59729 | Taeniopygia guttata | ENSTGUG00000010962 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018531 | 31033 | Takifugu rubripes | ENSTRUG00000006971 |
9478 | Tarsius syrichta | ENSTSYG00000009248 | 30538 | Vicugna pacos | ENSVPAG00000002215 |
8364 | Xenopus tropicalis | ENSXETG00000011529 | 8083 | Xiphophorus maculatus | ENSXMAG00000004286 |