Basic Information | |||
Gene ID | 655469 | ||
Gene Name | Clk; TcasGA2_TC000088 | ||
Full Name | CLOCK | ||
Organism | Tribolium castaneum [7070] |
Cross Reference | |||
UniProt | A9XCF0 | UniGene | Tca.13478 |
PDB | NULL | OMIM | NULL |
KEGG | tca:655469 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7070.A9XCF0 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001106937 | Gene3D | G3DSA:4.10.280.10 | IPR011598 | 8 | 59 | 4.40e-10 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_001106937 | Pfam | PF00010 | IPR011598 | 11 | 59 | 2.20e-06 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_001106937 | Pfam | PF00989 | IPR013767 | 88 | 161 | 6.80e-07 | PAS fold |
NP_001106937 | PRINTS | PR00785 | IPR001067 | 25 | 40 | 7.70e-08 | Nuclear translocator |
NP_001106937 | PRINTS | PR00785 | IPR001067 | 76 | 99 | 7.70e-08 | Nuclear translocator |
NP_001106937 | ProSiteProfiles | PS50112 | IPR000014 | 83 | 153 | 0.00e-00 | PAS domain |
NP_001106937 | ProSiteProfiles | PS50888 | IPR011598 | 10 | 60 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_001106937 | SMART | SM00086 | IPR001610 | 295 | 338 | 1.40e-07 | PAC motif |
NP_001106937 | SMART | SM00091 | IPR000014 | 223 | 289 | 1.40e-07 | PAS domain |
NP_001106937 | SMART | SM00091 | IPR000014 | 85 | 151 | 3.20e-08 | PAS domain |
NP_001106937 | SMART | SM00353 | IPR011598 | 16 | 66 | 1.20e-08 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_001106937 | SUPERFAMILY | SSF47459 | IPR011598 | 7 | 64 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_001106937 | SUPERFAMILY | SSF55785 | IPR000014 | 234 | 335 | 0.00e-00 | PAS domain |
NP_001106937 | SUPERFAMILY | SSF55785 | IPR000014 | 94 | 167 | 0.00e-00 | PAS domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001106937 | PF14598 | 8e-25 | PAS_11 | PAS domain |
NP_001106937 | PF08447 | 6.2e-16 | PAS_3 | PAS fold |
NP_001106937 | PF00989 | 2.8e-08 | PAS | PAS fold |
NP_001106937 | PF00010 | 9.9e-07 | HLH | Helix-loop-helix DNA-binding domain |
NP_001106937 | PF13426 | 0.00077 | PAS_9 | PAS domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001106937 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_001106937 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
NP_001106937 | GO:0006974 | biological_process | cellular response to DNA damage stimulus |
NP_001106937 | GO:0007165 | biological_process | signal transduction |
NP_001106937 | GO:0048511 | biological_process | rhythmic process |
NP_001106937 | GO:0005634 | cellular_component | nucleus |
NP_001106937 | GO:0005667 | cellular_component | transcription factor complex |
NP_001106937 | GO:0005694 | cellular_component | chromosome |
NP_001106937 | GO:0005737 | cellular_component | cytoplasm |
NP_001106937 | GO:0003677 | molecular_function | DNA binding |
NP_001106937 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_001106937 | GO:0004871 | molecular_function | signal transducer activity |
NP_001106937 | GO:0046983 | molecular_function | protein dimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100349684 | 30195 | Bombus terrestris | 100650446 |
8128 | Oreochromis niloticus | 100690629 | 39432 | Saimiri boliviensis | 101035173 |
9685 | Felis catus | 101088483 | 7460 | Apis mellifera | 410757 |
7425 | Nasonia vitripennis | 100114103 | 7029 | Acyrthosiphon pisum | 100163752 |
9483 | Callithrix jacchus | 100407407 | 61853 | Nomascus leucogenys | 100606130 |
132113 | Bombus impatiens | 100747861 | 10029 | Cricetulus griseus | 100756929 |
7463 | Apis florea | 100869092 | 143995 | Megachile rotundata | 100878984 |
34638 | Metaseiulus occidentalis | 100900259 | 9597 | Pan paniscus | 100986920 |
9555 | Papio anubis | 101017477 | 9595 | Gorilla gorilla | 101128296 |
9669 | Mustela putorius furo | 101674500 | 43179 | Ictidomys tridecemlineatus | 101958731 |
13735 | Pelodiscus sinensis | 102444504 | 7955 | Danio rerio | 352927 |
7227 | Drosophila melanogaster | 38872 | 7668 | Strongylocentrotus purpuratus | 576191 |
10116 | Rattus norvegicus | 60447 | 28377 | Anolis carolinensis | ENSACAG00000009335 |
9358 | Choloepus hoffmanni | ENSCHOG00000008122 | 9361 | Dasypus novemcinctus | ENSDNOG00000018101 |
10020 | Dipodomys ordii | ENSDORG00000008014 | 9796 | Equus caballus | ENSECAG00000006331 |
9365 | Erinaceus europaeus | ENSEEUG00000000876 | 9371 | Echinops telfairi | ENSETEG00000015604 |
69293 | Gasterosteus aculeatus | ENSGACG00000015939 | 8049 | Gadus morhua | ENSGMOG00000004825 |
9315 | Macropus eugenii | ENSMEUG00000005481 | 9103 | Meleagris gallopavo | ENSMGAG00000014799 |
30608 | Microcebus murinus | ENSMICG00000016027 | 59463 | Myotis lucifugus | ENSMLUG00000010007 |
9258 | Ornithorhynchus anatinus | ENSOANG00000003801 | 30611 | Otolemur garnettii | ENSOGAG00000012464 |
8090 | Oryzias latipes | ENSORLG00000004495 | 9813 | Procavia capensis | ENSPCAG00000004689 |
7757 | Petromyzon marinus | ENSPMAG00000002704 | 42254 | Sorex araneus | ENSSARG00000002584 |
9305 | Sarcophilus harrisii | ENSSHAG00000010526 | 9823 | Sus scrofa | ENSSSCG00000008909 |
59729 | Taeniopygia guttata | ENSTGUG00000010003 | 31033 | Takifugu rubripes | ENSTRUG00000015488 |
9739 | Tursiops truncatus | ENSTTRG00000000960 | 8364 | Xenopus tropicalis | ENSXETG00000021064 |
8083 | Xiphophorus maculatus | ENSXMAG00000016928 | 9606 | Homo sapiens | 9575 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000018420 | 9913 | Bos taurus | ENSBTAG00000044044 |
9615 | Canis familiaris | ENSCAFG00000002140 | 10141 | Cavia porcellus | ENSCPOG00000011807 |
9031 | Gallus gallus | ENSGALG00000016774 | 7897 | Latimeria chalumnae | ENSLACG00000013436 |
9785 | Loxodonta africana | ENSLAFG00000009558 | 9544 | Macaca mulatta | ENSMMUG00000001919 |
13616 | Monodelphis domestica | ENSMODG00000001691 | 9978 | Ochotona princeps | ENSOPRG00000001179 |
9601 | Pongo abelii | ENSPPYG00000014762 | 132908 | Pteropus vampyrus | ENSPVAG00000008960 |
37347 | Tupaia belangeri | ENSTBEG00000012008 | 99883 | Tetraodon nigroviridis | ENSTNIG00000017652 |
9478 | Tarsius syrichta | ENSTSYG00000003546 | 30538 | Vicugna pacos | ENSVPAG00000006438 |