Basic Information
Gene ID ENSAMEG00000017129
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Ailuropoda melanoleuca [9646]

Cross Reference
UniProt G1MFG4 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 201 269 3.80e-26 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 364 434 4.10e-24 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 473 524 3.60e-08 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 535 597 1.20e-20 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 692 757 6.30e-21 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Gene3D G3DSA:2.40.50.140 IPR012340 72 140 1.30e-25 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 Pfam PF00313 IPR002059 202 263 1.50e-16 Cold-shock protein, DNA-binding
ENSAMEP00000018094 Pfam PF00313 IPR002059 367 428 8.30e-09 Cold-shock protein, DNA-binding
ENSAMEP00000018094 Pfam PF00313 IPR002059 536 596 1.20e-14 Cold-shock protein, DNA-binding
ENSAMEP00000018094 Pfam PF00313 IPR002059 690 752 4.00e-15 Cold-shock protein, DNA-binding
ENSAMEP00000018094 Pfam PF00313 IPR002059 74 136 1.80e-14 Cold-shock protein, DNA-binding
ENSAMEP00000018094 Pfam PF12901 IPR024642 771 804 6.20e-10 SUZ-C domain
ENSAMEP00000018094 ProSitePatterns PS00352 IPR019844 213 232 - Cold-shock conserved site
ENSAMEP00000018094 ProSitePatterns PS00352 IPR019844 376 395 - Cold-shock conserved site
ENSAMEP00000018094 ProSitePatterns PS00352 IPR019844 545 564 - Cold-shock conserved site
ENSAMEP00000018094 ProSitePatterns PS00352 IPR019844 84 103 - Cold-shock conserved site
ENSAMEP00000018094 SMART SM00357 IPR011129 203 264 4.10e-21 Cold shock protein
ENSAMEP00000018094 SMART SM00357 IPR011129 366 429 4.40e-18 Cold shock protein
ENSAMEP00000018094 SMART SM00357 IPR011129 535 597 7.60e-17 Cold shock protein
ENSAMEP00000018094 SMART SM00357 IPR011129 690 753 1.10e-18 Cold shock protein
ENSAMEP00000018094 SMART SM00357 IPR011129 74 137 9.70e-19 Cold shock protein
ENSAMEP00000018094 SUPERFAMILY SSF50249 IPR012340 197 269 0.00e-00 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 SUPERFAMILY SSF50249 IPR012340 352 433 0.00e-00 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 SUPERFAMILY SSF50249 IPR012340 528 597 0.00e-00 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 SUPERFAMILY SSF50249 IPR012340 64 140 0.00e-00 Nucleic acid-binding, OB-fold
ENSAMEP00000018094 SUPERFAMILY SSF50249 IPR012340 676 756 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSAMEP00000018094 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSAMEP00000018094 PF14444 5.3e-15 S1-like S1-like
ENSAMEP00000018094 PF12901 2.7e-10 SUZ-C SUZ-C motif
ENSAMEP00000018094 PF11604 4.1e-07 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSAMEP00000018094 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSAMEP00000018094 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSAMEP00000018094 GO:0005737 cellular_component cytoplasm
ENSAMEP00000018094 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSAMEP00000018094 GO:0003677 molecular_function DNA binding
ENSAMEP00000018094 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 400682 Amphimedon queenslandica 100631963
59463 Myotis lucifugus 102429010 10090 Mus musculus 229663
7070 Tribolium castaneum 655517 7425 Nasonia vitripennis 100123206
61853 Nomascus leucogenys 100590871 8128 Oreochromis niloticus 100701469
34638 Metaseiulus occidentalis 100908518 9597 Pan paniscus 100968628
9555 Papio anubis 101024024 39432 Saimiri boliviensis 101034862
9595 Gorilla gorilla 101146917 9606 Homo sapiens 7812
7719 Ciona intestinalis ENSCING00000014465 9483 Callithrix jacchus ENSCJAG00000012565
9361 Dasypus novemcinctus ENSDNOG00000010287 10020 Dipodomys ordii ENSDORG00000011609
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
8049 Gadus morhua ENSGMOG00000012731 9103 Meleagris gallopavo ENSMGAG00000016381
9258 Ornithorhynchus anatinus ENSOANG00000003346 9813 Procavia capensis ENSPCAG00000014368
9601 Pongo abelii ENSPPYG00000000996 132908 Pteropus vampyrus ENSPVAG00000008225
59729 Taeniopygia guttata ENSTGUG00000000972 31033 Takifugu rubripes ENSTRUG00000007996
9739 Tursiops truncatus ENSTTRG00000015583 30538 Vicugna pacos ENSVPAG00000000749
8083 Xiphophorus maculatus ENSXMAG00000009080 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 51511 Ciona savignyi ENSCSAVG00000008100
9796 Equus caballus ENSECAG00000020885 9365 Erinaceus europaeus ENSEEUG00000006286
9371 Echinops telfairi ENSETEG00000006280 9685 Felis catus ENSFCAG00000029266
9785 Loxodonta africana ENSLAFG00000007150 9315 Macropus eugenii ENSMEUG00000002677
9669 Mustela putorius furo ENSMPUG00000005753 9978 Ochotona princeps ENSOPRG00000005002
8090 Oryzias latipes ENSORLG00000000707 13735 Pelodiscus sinensis ENSPSIG00000003823
42254 Sorex araneus ENSSARG00000000738 9823 Sus scrofa ENSSSCG00000006752
99883 Tetraodon nigroviridis ENSTNIG00000010878 9478 Tarsius syrichta ENSTSYG00000003747