Basic Information
Gene ID ENSLAFG00000007150
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Loxodonta africana [9785]

Cross Reference
UniProt G3SZH0 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 186 254 9.30e-26 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 349 419 1.80e-24 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 458 515 1.10e-08 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 519 583 5.40e-21 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 57 125 1.30e-25 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Gene3D G3DSA:2.40.50.140 IPR012340 678 743 6.20e-21 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 Pfam PF00313 IPR002059 187 248 8.20e-16 Cold-shock protein, DNA-binding
ENSLAFP00000006015 Pfam PF00313 IPR002059 352 412 9.10e-09 Cold-shock protein, DNA-binding
ENSLAFP00000006015 Pfam PF00313 IPR002059 522 582 3.30e-14 Cold-shock protein, DNA-binding
ENSLAFP00000006015 Pfam PF00313 IPR002059 59 121 1.80e-14 Cold-shock protein, DNA-binding
ENSLAFP00000006015 Pfam PF00313 IPR002059 676 738 3.90e-15 Cold-shock protein, DNA-binding
ENSLAFP00000006015 Pfam PF12901 IPR024642 757 790 7.60e-13 SUZ-C domain
ENSLAFP00000006015 ProSitePatterns PS00352 IPR019844 198 217 - Cold-shock conserved site
ENSLAFP00000006015 ProSitePatterns PS00352 IPR019844 361 380 - Cold-shock conserved site
ENSLAFP00000006015 ProSitePatterns PS00352 IPR019844 531 550 - Cold-shock conserved site
ENSLAFP00000006015 ProSitePatterns PS00352 IPR019844 69 88 - Cold-shock conserved site
ENSLAFP00000006015 SMART SM00357 IPR011129 188 249 7.80e-20 Cold shock protein
ENSLAFP00000006015 SMART SM00357 IPR011129 351 414 3.00e-18 Cold shock protein
ENSLAFP00000006015 SMART SM00357 IPR011129 521 583 1.60e-17 Cold shock protein
ENSLAFP00000006015 SMART SM00357 IPR011129 59 122 9.70e-19 Cold shock protein
ENSLAFP00000006015 SMART SM00357 IPR011129 676 739 1.10e-18 Cold shock protein
ENSLAFP00000006015 SUPERFAMILY SSF50249 IPR012340 182 254 0.00e-00 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 SUPERFAMILY SSF50249 IPR012340 337 418 0.00e-00 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 SUPERFAMILY SSF50249 IPR012340 49 125 0.00e-00 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 SUPERFAMILY SSF50249 IPR012340 504 583 0.00e-00 Nucleic acid-binding, OB-fold
ENSLAFP00000006015 SUPERFAMILY SSF50249 IPR012340 662 742 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSLAFP00000006015 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSLAFP00000006015 PF14444 1.5e-15 S1-like S1-like
ENSLAFP00000006015 PF12901 3.7e-13 SUZ-C SUZ-C motif
ENSLAFP00000006015 PF11604 4.7e-06 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSLAFP00000006015 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSLAFP00000006015 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSLAFP00000006015 GO:0005737 cellular_component cytoplasm
ENSLAFP00000006015 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSLAFP00000006015 GO:0003677 molecular_function DNA binding
ENSLAFP00000006015 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 10090 Mus musculus 229663
9615 Canis familiaris ENSCAFG00000009618 9358 Choloepus hoffmanni ENSCHOG00000000918
9365 Erinaceus europaeus ENSEEUG00000006286 7425 Nasonia vitripennis 100123206
61853 Nomascus leucogenys 100590871 400682 Amphimedon queenslandica 100631963
8128 Oreochromis niloticus 100701469 34638 Metaseiulus occidentalis 100908518
9597 Pan paniscus 100968628 9555 Papio anubis 101024024
39432 Saimiri boliviensis 101034862 9595 Gorilla gorilla 101146917
59463 Myotis lucifugus 102429010 7070 Tribolium castaneum 655517
9606 Homo sapiens 7812 9646 Ailuropoda melanoleuca ENSAMEG00000017129
7719 Ciona intestinalis ENSCING00000014465 9483 Callithrix jacchus ENSCJAG00000012565
51511 Ciona savignyi ENSCSAVG00000008100 9361 Dasypus novemcinctus ENSDNOG00000010287
10020 Dipodomys ordii ENSDORG00000011609 9796 Equus caballus ENSECAG00000020885
9371 Echinops telfairi ENSETEG00000006280 9685 Felis catus ENSFCAG00000029266
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
8049 Gadus morhua ENSGMOG00000012731 9315 Macropus eugenii ENSMEUG00000002677
9103 Meleagris gallopavo ENSMGAG00000016381 9258 Ornithorhynchus anatinus ENSOANG00000003346
9813 Procavia capensis ENSPCAG00000014368 9601 Pongo abelii ENSPPYG00000000996
132908 Pteropus vampyrus ENSPVAG00000008225 42254 Sorex araneus ENSSARG00000000738
9823 Sus scrofa ENSSSCG00000006752 59729 Taeniopygia guttata ENSTGUG00000000972
31033 Takifugu rubripes ENSTRUG00000007996 9478 Tarsius syrichta ENSTSYG00000003747
9739 Tursiops truncatus ENSTTRG00000015583 30538 Vicugna pacos ENSVPAG00000000749
8083 Xiphophorus maculatus ENSXMAG00000009080 9669 Mustela putorius furo ENSMPUG00000005753
9978 Ochotona princeps ENSOPRG00000005002 8090 Oryzias latipes ENSORLG00000000707
13735 Pelodiscus sinensis ENSPSIG00000003823 99883 Tetraodon nigroviridis ENSTNIG00000010878