Basic Information
Gene ID ENSTGUG00000000972
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Taeniopygia guttata [59729]

Cross Reference
UniProt H0YRV0 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 185 253 1.20e-26 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 25 93 2.10e-25 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 350 420 8.50e-24 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 457 513 9.50e-06 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 518 577 2.70e-18 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Gene3D G3DSA:2.40.50.140 IPR012340 676 740 1.00e-20 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 Pfam PF00313 IPR002059 186 247 6.80e-17 Cold-shock protein, DNA-binding
ENSTGUP00000001009 Pfam PF00313 IPR002059 27 89 1.20e-14 Cold-shock protein, DNA-binding
ENSTGUP00000001009 Pfam PF00313 IPR002059 352 413 2.90e-09 Cold-shock protein, DNA-binding
ENSTGUP00000001009 Pfam PF00313 IPR002059 521 577 2.50e-13 Cold-shock protein, DNA-binding
ENSTGUP00000001009 Pfam PF00313 IPR002059 674 736 3.90e-15 Cold-shock protein, DNA-binding
ENSTGUP00000001009 Pfam PF12901 IPR024642 755 788 1.00e-13 SUZ-C domain
ENSTGUP00000001009 ProSitePatterns PS00352 IPR019844 197 216 - Cold-shock conserved site
ENSTGUP00000001009 ProSitePatterns PS00352 IPR019844 362 381 - Cold-shock conserved site
ENSTGUP00000001009 ProSitePatterns PS00352 IPR019844 37 56 - Cold-shock conserved site
ENSTGUP00000001009 ProSitePatterns PS00352 IPR019844 530 549 - Cold-shock conserved site
ENSTGUP00000001009 SMART SM00357 IPR011129 187 248 7.20e-22 Cold shock protein
ENSTGUP00000001009 SMART SM00357 IPR011129 27 90 1.20e-18 Cold shock protein
ENSTGUP00000001009 SMART SM00357 IPR011129 352 415 1.30e-16 Cold shock protein
ENSTGUP00000001009 SMART SM00357 IPR011129 520 581 1.60e-14 Cold shock protein
ENSTGUP00000001009 SMART SM00357 IPR011129 674 737 1.10e-18 Cold shock protein
ENSTGUP00000001009 SUPERFAMILY SSF50249 IPR012340 17 93 0.00e-00 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 SUPERFAMILY SSF50249 IPR012340 180 253 0.00e-00 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 SUPERFAMILY SSF50249 IPR012340 341 419 0.00e-00 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 SUPERFAMILY SSF50249 IPR012340 516 577 0.00e-00 Nucleic acid-binding, OB-fold
ENSTGUP00000001009 SUPERFAMILY SSF50249 IPR012340 660 739 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSTGUP00000001009 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSTGUP00000001009 PF14444 6.2e-15 S1-like S1-like
ENSTGUP00000001009 PF12901 4.8e-14 SUZ-C SUZ-C motif
ENSTGUP00000001009 PF11604 2.9e-06 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSTGUP00000001009 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSTGUP00000001009 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSTGUP00000001009 GO:0005737 cellular_component cytoplasm
ENSTGUP00000001009 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSTGUP00000001009 GO:0003677 molecular_function DNA binding
ENSTGUP00000001009 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 61853 Nomascus leucogenys 100590871
400682 Amphimedon queenslandica 100631963 39432 Saimiri boliviensis 101034862
59463 Myotis lucifugus 102429010 10090 Mus musculus 229663
7070 Tribolium castaneum 655517 9606 Homo sapiens 7812
9646 Ailuropoda melanoleuca ENSAMEG00000017129 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 51511 Ciona savignyi ENSCSAVG00000008100
10020 Dipodomys ordii ENSDORG00000011609 9796 Equus caballus ENSECAG00000020885
9365 Erinaceus europaeus ENSEEUG00000006286 9371 Echinops telfairi ENSETEG00000006280
9685 Felis catus ENSFCAG00000029266 8049 Gadus morhua ENSGMOG00000012731
9785 Loxodonta africana ENSLAFG00000007150 9315 Macropus eugenii ENSMEUG00000002677
9669 Mustela putorius furo ENSMPUG00000005753 9978 Ochotona princeps ENSOPRG00000005002
8090 Oryzias latipes ENSORLG00000000707 9601 Pongo abelii ENSPPYG00000000996
13735 Pelodiscus sinensis ENSPSIG00000003823 42254 Sorex araneus ENSSARG00000000738
9823 Sus scrofa ENSSSCG00000006752 7425 Nasonia vitripennis 100123206
8128 Oreochromis niloticus 100701469 34638 Metaseiulus occidentalis 100908518
9597 Pan paniscus 100968628 9555 Papio anubis 101024024
9595 Gorilla gorilla 101146917 7719 Ciona intestinalis ENSCING00000014465
9483 Callithrix jacchus ENSCJAG00000012565 9361 Dasypus novemcinctus ENSDNOG00000010287
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
9103 Meleagris gallopavo ENSMGAG00000016381 9258 Ornithorhynchus anatinus ENSOANG00000003346
9813 Procavia capensis ENSPCAG00000014368 132908 Pteropus vampyrus ENSPVAG00000008225
31033 Takifugu rubripes ENSTRUG00000007996 9739 Tursiops truncatus ENSTTRG00000015583
30538 Vicugna pacos ENSVPAG00000000749 8083 Xiphophorus maculatus ENSXMAG00000009080
99883 Tetraodon nigroviridis ENSTNIG00000010878 9478 Tarsius syrichta ENSTSYG00000003747