Basic Information
Gene ID ENSCSAVG00000008100
Gene Name Csa.8024
Full Name Uncharacterized protein
Organism Ciona savignyi [51511]

Cross Reference
UniProt H2Z898 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 136 192 3.90e-05 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 196 265 1.00e-22 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 24 94 3.30e-24 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 363 436 9.90e-20 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 545 575 5.90e-11 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 665 697 5.90e-11 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Gene3D G3DSA:2.40.50.140 IPR012340 702 771 4.20e-15 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 Pfam PF00313 IPR002059 199 258 9.10e-14 Cold-shock protein, DNA-binding
ENSCSAVP00000013811 Pfam PF00313 IPR002059 26 88 8.00e-12 Cold-shock protein, DNA-binding
ENSCSAVP00000013811 Pfam PF00313 IPR002059 366 414 7.10e-06 Cold-shock protein, DNA-binding
ENSCSAVP00000013811 Pfam PF00313 IPR002059 546 576 1.30e-04 Cold-shock protein, DNA-binding
ENSCSAVP00000013811 Pfam PF00313 IPR002059 701 768 1.90e-05 Cold-shock protein, DNA-binding
ENSCSAVP00000013811 ProSitePatterns PS00352 IPR019844 209 228 - Cold-shock conserved site
ENSCSAVP00000013811 ProSitePatterns PS00352 IPR019844 36 55 - Cold-shock conserved site
ENSCSAVP00000013811 ProSitePatterns PS00352 IPR019844 555 574 - Cold-shock conserved site
ENSCSAVP00000013811 SMART SM00357 IPR011129 199 260 1.20e-15 Cold shock protein
ENSCSAVP00000013811 SMART SM00357 IPR011129 26 89 9.10e-14 Cold shock protein
ENSCSAVP00000013811 SMART SM00357 IPR011129 366 431 2.70e-06 Cold shock protein
ENSCSAVP00000013811 SMART SM00357 IPR011129 700 770 2.90e-05 Cold shock protein
ENSCSAVP00000013811 SUPERFAMILY SSF50249 IPR012340 196 261 0.00e-00 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 SUPERFAMILY SSF50249 IPR012340 20 94 0.00e-00 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 SUPERFAMILY SSF50249 IPR012340 356 435 0.00e-00 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 SUPERFAMILY SSF50249 IPR012340 544 578 0.00e-00 Nucleic acid-binding, OB-fold
ENSCSAVP00000013811 SUPERFAMILY SSF50249 IPR012340 699 770 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCSAVP00000013811 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSCSAVP00000013811 PF14444 6.5e-10 S1-like S1-like
ENSCSAVP00000013811 PF11604 7.2e-05 CusF_Ec Copper binding periplasmic protein CusF
ENSCSAVP00000013811 PF12901 0.00064 SUZ-C SUZ-C motif

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCSAVP00000013811 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSCSAVP00000013811 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSCSAVP00000013811 GO:0005737 cellular_component cytoplasm
ENSCSAVP00000013811 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSCSAVP00000013811 GO:0003677 molecular_function DNA binding
ENSCSAVP00000013811 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 400682 Amphimedon queenslandica 100631963
10090 Mus musculus 229663 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 7425 Nasonia vitripennis 100123206
61853 Nomascus leucogenys 100590871 8128 Oreochromis niloticus 100701469
34638 Metaseiulus occidentalis 100908518 9597 Pan paniscus 100968628
9555 Papio anubis 101024024 39432 Saimiri boliviensis 101034862
9595 Gorilla gorilla 101146917 59463 Myotis lucifugus 102429010
7070 Tribolium castaneum 655517 9606 Homo sapiens 7812
9646 Ailuropoda melanoleuca ENSAMEG00000017129 7719 Ciona intestinalis ENSCING00000014465
9483 Callithrix jacchus ENSCJAG00000012565 9361 Dasypus novemcinctus ENSDNOG00000010287
10020 Dipodomys ordii ENSDORG00000011609 9371 Echinops telfairi ENSETEG00000006280
9685 Felis catus ENSFCAG00000029266 69293 Gasterosteus aculeatus ENSGACG00000004544
9031 Gallus gallus ENSGALG00000002139 8049 Gadus morhua ENSGMOG00000012731
9315 Macropus eugenii ENSMEUG00000002677 9103 Meleagris gallopavo ENSMGAG00000016381
9258 Ornithorhynchus anatinus ENSOANG00000003346 9813 Procavia capensis ENSPCAG00000014368
9601 Pongo abelii ENSPPYG00000000996 132908 Pteropus vampyrus ENSPVAG00000008225
9823 Sus scrofa ENSSSCG00000006752 59729 Taeniopygia guttata ENSTGUG00000000972
31033 Takifugu rubripes ENSTRUG00000007996 9739 Tursiops truncatus ENSTTRG00000015583
30538 Vicugna pacos ENSVPAG00000000749 8083 Xiphophorus maculatus ENSXMAG00000009080
9796 Equus caballus ENSECAG00000020885 9365 Erinaceus europaeus ENSEEUG00000006286
9785 Loxodonta africana ENSLAFG00000007150 9669 Mustela putorius furo ENSMPUG00000005753
9978 Ochotona princeps ENSOPRG00000005002 8090 Oryzias latipes ENSORLG00000000707
13735 Pelodiscus sinensis ENSPSIG00000003823 42254 Sorex araneus ENSSARG00000000738
99883 Tetraodon nigroviridis ENSTNIG00000010878 9478 Tarsius syrichta ENSTSYG00000003747