Basic Information
Gene ID 100304455
Gene Name sox17
Full Name SRY-box containing gene 17
Organism Oryzias latipes [8090]

Cross Reference
UniProt C3VV17 UniGene Ola.2961
PDB NULL OMIM NULL
KEGG ola:100304455 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8090.ENSORLP00000014461

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000014461 Gene3D G3DSA:1.10.30.10 IPR009071 63 144 5.00e-34 High mobility group box domain
ENSORLP00000014461 Pfam PF00505 IPR009071 65 133 4.90e-25 High mobility group box domain
ENSORLP00000014461 Pfam PF12067 IPR021934 190 396 8.30e-69 Sox C-terminal transactivation domain
ENSORLP00000014461 ProSiteProfiles PS50118 IPR009071 65 133 0.00e-00 High mobility group box domain
ENSORLP00000014461 ProSiteProfiles PS51516 IPR021934 282 397 0.00e-00 Sox C-terminal transactivation domain
ENSORLP00000014461 SMART SM00398 IPR009071 64 134 6.10e-31 High mobility group box domain
ENSORLP00000014461 SUPERFAMILY SSF47095 IPR009071 51 137 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000014461 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
ENSORLP00000014461 PF00505 3e-25 HMG_box HMG (high mobility group) box
ENSORLP00000014461 PF09011 7e-12 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000014461 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000014461 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000014461 GO:0007275 biological_process multicellular organismal development
ENSORLP00000014461 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSORLP00000014461 GO:0005634 cellular_component nucleus
ENSORLP00000014461 GO:0003677 molecular_function DNA binding
ENSORLP00000014461 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100030119 7425 Nasonia vitripennis 100120206
9597 Pan paniscus 100969672 9555 Papio anubis 101022699
43179 Ictidomys tridecemlineatus 101966515 8083 Xiphophorus maculatus 102225699
7955 Danio rerio 30544 7668 Strongylocentrotus purpuratus 587141
30538 Vicugna pacos ENSVPAG00000005064 9483 Callithrix jacchus 100396115
61853 Nomascus leucogenys 100591356 143995 Megachile rotundata 100876699
31033 Takifugu rubripes 101080200 9669 Mustela putorius furo 101683331
7897 Latimeria chalumnae 102363300 59463 Myotis lucifugus 102427708
10116 Rattus norvegicus 312936 7227 Drosophila melanogaster 36575
9913 Bos taurus 534010 9606 Homo sapiens 64321
9646 Ailuropoda melanoleuca ENSAMEG00000011673 9615 Canis familiaris ENSCAFG00000025327
10141 Cavia porcellus ENSCPOG00000000892 51511 Ciona savignyi ENSCSAVG00000008188
9796 Equus caballus ENSECAG00000009206 9371 Echinops telfairi ENSETEG00000016915
69293 Gasterosteus aculeatus ENSGACG00000004347 9595 Gorilla gorilla ENSGGOG00000023175
8049 Gadus morhua ENSGMOG00000005913 9785 Loxodonta africana ENSLAFG00000028829
9315 Macropus eugenii ENSMEUG00000011391 30608 Microcebus murinus ENSMICG00000000709
9986 Oryctolagus cuniculus ENSOCUG00000012651 30611 Otolemur garnettii ENSOGAG00000034932
9978 Ochotona princeps ENSOPRG00000007021 132908 Pteropus vampyrus ENSPVAG00000009339
42254 Sorex araneus ENSSARG00000009573 59729 Taeniopygia guttata ENSTGUG00000011034
99883 Tetraodon nigroviridis ENSTNIG00000017129