Basic Information
Gene ID 100396115
Gene Name SOX17
Full Name Transcription factor SOX-17
Organism Callithrix jacchus [9483]

Cross Reference
UniProt F6W913 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCJAP00000030751 Gene3D G3DSA:1.10.30.10 IPR009071 67 147 2.70e-34 High mobility group box domain
ENSCJAP00000030751 Pfam PF00505 IPR009071 68 136 2.60e-25 High mobility group box domain
ENSCJAP00000030751 Pfam PF12067 IPR021934 201 412 1.20e-43 Sox C-terminal transactivation domain
ENSCJAP00000030751 ProSiteProfiles PS50118 IPR009071 68 136 0.00e-00 High mobility group box domain
ENSCJAP00000030751 ProSiteProfiles PS51516 IPR021934 280 413 0.00e-00 Sox C-terminal transactivation domain
ENSCJAP00000030751 SMART SM00398 IPR009071 67 137 5.00e-31 High mobility group box domain
ENSCJAP00000030751 SUPERFAMILY SSF47095 IPR009071 58 140 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCJAP00000030751 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
ENSCJAP00000030751 PF00505 1.7e-25 HMG_box HMG (high mobility group) box
ENSCJAP00000030751 PF09011 3.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCJAP00000030751 GO:0006351 biological_process transcription, DNA-templated
ENSCJAP00000030751 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSCJAP00000030751 GO:0007275 biological_process multicellular organismal development
ENSCJAP00000030751 GO:0007369 biological_process gastrulation
ENSCJAP00000030751 GO:0016055 biological_process Wnt signaling pathway
ENSCJAP00000030751 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSCJAP00000030751 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSCJAP00000030751 GO:0005634 cellular_component nucleus
ENSCJAP00000030751 GO:0003677 molecular_function DNA binding
ENSCJAP00000030751 GO:0008013 molecular_function beta-catenin binding
ENSCJAP00000030751 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100120206 10224 Saccoglossus kowalevskii 100303486
13616 Monodelphis domestica 100030119 9823 Sus scrofa 100155811
7029 Acyrthosiphon pisum 100165234 8090 Oryzias latipes 100304455
61853 Nomascus leucogenys 100591356 143995 Megachile rotundata 100876699
9597 Pan paniscus 100969672 9555 Papio anubis 101022699
39432 Saimiri boliviensis 101053885 31033 Takifugu rubripes 101080200
9669 Mustela putorius furo 101683331 43179 Ictidomys tridecemlineatus 101966515
8083 Xiphophorus maculatus 102225699 59463 Myotis lucifugus 102427708
10090 Mus musculus 20680 7955 Danio rerio 30544
10116 Rattus norvegicus 312936 7227 Drosophila melanogaster 36575
9913 Bos taurus 534010 7668 Strongylocentrotus purpuratus 587141
9606 Homo sapiens 64321 9544 Macaca mulatta 697999
28377 Anolis carolinensis ENSACAG00000017977 9615 Canis familiaris ENSCAFG00000025327
7719 Ciona intestinalis ENSCING00000007173 9371 Echinops telfairi ENSETEG00000016915
9685 Felis catus ENSFCAG00000027132 69293 Gasterosteus aculeatus ENSGACG00000004347
9031 Gallus gallus ENSGALG00000028422 9595 Gorilla gorilla ENSGGOG00000023175
8049 Gadus morhua ENSGMOG00000005913 9785 Loxodonta africana ENSLAFG00000028829
9315 Macropus eugenii ENSMEUG00000011391 9103 Meleagris gallopavo ENSMGAG00000014195
30608 Microcebus murinus ENSMICG00000000709 9986 Oryctolagus cuniculus ENSOCUG00000012651
8128 Oreochromis niloticus ENSONIG00000015337 9978 Ochotona princeps ENSOPRG00000007021
9813 Procavia capensis ENSPCAG00000003188 7757 Petromyzon marinus ENSPMAG00000009255
9598 Pan troglodytes ENSPTRG00000028919 132908 Pteropus vampyrus ENSPVAG00000009339
42254 Sorex araneus ENSSARG00000009573 37347 Tupaia belangeri ENSTBEG00000003228
59729 Taeniopygia guttata ENSTGUG00000011034 30538 Vicugna pacos ENSVPAG00000005064
10029 Cricetulus griseus 100754082 34638 Metaseiulus occidentalis 100908412
7897 Latimeria chalumnae 102363300 8364 Xenopus tropicalis 549080
9646 Ailuropoda melanoleuca ENSAMEG00000011673 10141 Cavia porcellus ENSCPOG00000000892
51511 Ciona savignyi ENSCSAVG00000008188 9796 Equus caballus ENSECAG00000009206
30611 Otolemur garnettii ENSOGAG00000034932 9601 Pongo abelii ENSPPYG00000029608
99883 Tetraodon nigroviridis ENSTNIG00000017129