Basic Information
Gene ID 534010
Gene Name SOX17
Full Name Uncharacterized protein
Organism Bos taurus [9913]

Cross Reference
UniProt F1N1F9 UniGene Bt.112292
PDB NULL OMIM NULL
KEGG bta:534010 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSBTAP00000007553 Gene3D G3DSA:1.10.30.10 IPR009071 67 147 2.60e-34 High mobility group box domain
ENSBTAP00000007553 Pfam PF00505 IPR009071 68 136 2.50e-25 High mobility group box domain
ENSBTAP00000007553 Pfam PF12067 IPR021934 201 408 6.40e-43 Sox C-terminal transactivation domain
ENSBTAP00000007553 ProSiteProfiles PS50118 IPR009071 68 136 0.00e-00 High mobility group box domain
ENSBTAP00000007553 ProSiteProfiles PS51516 IPR021934 281 409 0.00e-00 Sox C-terminal transactivation domain
ENSBTAP00000007553 SMART SM00398 IPR009071 67 137 5.00e-31 High mobility group box domain
ENSBTAP00000007553 SUPERFAMILY SSF47095 IPR009071 58 140 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSBTAP00000007553 PF12067 1.90577e-43 Sox_C_TAD Sox C-terminal transactivation domain
ENSBTAP00000007553 PF00505 1.8e-25 HMG_box HMG (high mobility group) box
ENSBTAP00000007553 PF09011 3.6e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSBTAP00000007553 GO:0006351 biological_process transcription, DNA-templated
ENSBTAP00000007553 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSBTAP00000007553 GO:0007275 biological_process multicellular organismal development
ENSBTAP00000007553 GO:0007369 biological_process gastrulation
ENSBTAP00000007553 GO:0016055 biological_process Wnt signaling pathway
ENSBTAP00000007553 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSBTAP00000007553 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSBTAP00000007553 GO:0005634 cellular_component nucleus
ENSBTAP00000007553 GO:0003677 molecular_function DNA binding
ENSBTAP00000007553 GO:0008013 molecular_function beta-catenin binding
ENSBTAP00000007553 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100030119 7425 Nasonia vitripennis 100120206
10224 Saccoglossus kowalevskii 100303486 9483 Callithrix jacchus 100396115
61853 Nomascus leucogenys 100591356 143995 Megachile rotundata 100876699
34638 Metaseiulus occidentalis 100908412 31033 Takifugu rubripes 101080200
9669 Mustela putorius furo 101683331 7897 Latimeria chalumnae 102363300
59463 Myotis lucifugus 102427708 10116 Rattus norvegicus 312936
7029 Acyrthosiphon pisum 100165234 8090 Oryzias latipes 100304455
9597 Pan paniscus 100969672 9555 Papio anubis 101022699
39432 Saimiri boliviensis 101053885 43179 Ictidomys tridecemlineatus 101966515
8083 Xiphophorus maculatus 102225699 7955 Danio rerio 30544
7227 Drosophila melanogaster 36575 7668 Strongylocentrotus purpuratus 587141
28377 Anolis carolinensis ENSACAG00000017977 9978 Ochotona princeps ENSOPRG00000007021
59729 Taeniopygia guttata ENSTGUG00000011034 30538 Vicugna pacos ENSVPAG00000005064
9606 Homo sapiens 64321 9646 Ailuropoda melanoleuca ENSAMEG00000011673
9615 Canis familiaris ENSCAFG00000025327 10141 Cavia porcellus ENSCPOG00000000892
9796 Equus caballus ENSECAG00000009206 9371 Echinops telfairi ENSETEG00000016915
69293 Gasterosteus aculeatus ENSGACG00000004347 9595 Gorilla gorilla ENSGGOG00000023175
8049 Gadus morhua ENSGMOG00000005913 9785 Loxodonta africana ENSLAFG00000028829
9315 Macropus eugenii ENSMEUG00000011391 30608 Microcebus murinus ENSMICG00000000709
9986 Oryctolagus cuniculus ENSOCUG00000012651 30611 Otolemur garnettii ENSOGAG00000034932
9813 Procavia capensis ENSPCAG00000003188 7757 Petromyzon marinus ENSPMAG00000009255
132908 Pteropus vampyrus ENSPVAG00000009339 42254 Sorex araneus ENSSARG00000009573
99883 Tetraodon nigroviridis ENSTNIG00000017129