Basic Information | |||
Gene ID | 100970427 | ||
Gene Name | PRDM5 | ||
Full Name | PREDICTED: PR domain zinc finger protein 5 [Pan paniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 360 | 383 | 6.80e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 416 | 456 | 5.50e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 486 | 515 | 2.60e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 516 | 543 | 6.00e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 544 | 566 | 1.50e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 567 | 589 | 7.00e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 590 | 618 | 6.50e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 619 | 650 | 2.50e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 651 | 674 | 2.30e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 675 | 708 | 7.60e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 709 | 733 | 1.40e-15 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 734 | 762 | 1.80e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 769 | 792 | 5.30e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003816484 | Pfam | PF00096 | IPR007087 | 365 | 386 | 2.80e-03 | Zinc finger, C2H2 |
XP_003816484 | Pfam | PF00096 | IPR007087 | 428 | 453 | 5.70e-03 | Zinc finger, C2H2 |
XP_003816484 | Pfam | PF00096 | IPR007087 | 769 | 791 | 1.40e-03 | Zinc finger, C2H2 |
XP_003816484 | Pfam | PF12171 | IPR022755 | 542 | 564 | 2.60e-05 | Zinc finger, double-stranded RNA binding |
XP_003816484 | PIRSF | PIRSF037162 | IPR017125 | 165 | 796 | 0.00e-00 | PR-domain zinc finger protein PRDM5 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 335 | 356 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 430 | 453 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 463 | 483 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 488 | 508 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 516 | 536 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 544 | 564 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 572 | 592 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 600 | 621 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 629 | 649 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 657 | 677 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 685 | 705 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 713 | 733 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 741 | 761 | - | Zinc finger, C2H2 |
XP_003816484 | ProSitePatterns | PS00028 | IPR007087 | 770 | 791 | - | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 333 | 361 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 365 | 395 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 400 | 427 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 428 | 458 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 461 | 483 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 486 | 513 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 514 | 541 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 542 | 569 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 570 | 597 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 598 | 626 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 627 | 654 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 655 | 682 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 683 | 710 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 711 | 738 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 739 | 766 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50157 | IPR007087 | 768 | 791 | 0.00e-00 | Zinc finger, C2H2 |
XP_003816484 | ProSiteProfiles | PS50280 | IPR001214 | 166 | 290 | 0.00e-00 | SET domain |
XP_003816484 | SMART | SM00317 | IPR001214 | 178 | 296 | 1.20e-02 | SET domain |
XP_003816484 | SMART | SM00355 | IPR015880 | 333 | 356 | 3.80e-05 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 365 | 385 | 2.30e-02 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 400 | 420 | 3.50e-02 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 428 | 453 | 4.70e-05 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 461 | 483 | 2.50e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 486 | 508 | 1.00e-05 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 514 | 536 | 3.00e-04 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 542 | 564 | 6.80e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 570 | 592 | 5.40e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 598 | 621 | 3.90e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 627 | 649 | 1.70e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 655 | 677 | 1.00e-05 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 683 | 705 | 8.20e-07 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 711 | 733 | 1.10e-06 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 739 | 761 | 5.00e-05 | Zinc finger, C2H2-like |
XP_003816484 | SMART | SM00355 | IPR015880 | 768 | 791 | 2.00e-04 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003816484 | PF00096 | 0 | zf-C2H2 | Zinc finger, C2H2 type |
XP_003816484 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
XP_003816484 | PF13894 | 0 | zf-C2H2_4 | C2H2-type zinc finger |
XP_003816484 | PF12171 | 1.9e-29 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
XP_003816484 | PF12874 | 1e-19 | zf-met | Zinc-finger of C2H2 type |
XP_003816484 | PF13912 | 8.1e-13 | zf-C2H2_6 | C2H2-type zinc finger |
XP_003816484 | PF05605 | 4.2e-07 | zf-Di19 | Drought induced 19 protein (Di19), zinc-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003816484 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003816484 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003816484 | GO:0005634 | cellular_component | nucleus |
XP_003816484 | GO:0003677 | molecular_function | DNA binding |
XP_003816484 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
61853 | Nomascus leucogenys | 100583964 | 8128 | Oreochromis niloticus | 100697757 |
39432 | Saimiri boliviensis | 101050996 | 9358 | Choloepus hoffmanni | ENSCHOG00000007801 |
7955 | Danio rerio | ENSDARG00000006288 | 10020 | Dipodomys ordii | ENSDORG00000007739 |
9796 | Equus caballus | ENSECAG00000011516 | 9365 | Erinaceus europaeus | ENSEEUG00000010306 |
8049 | Gadus morhua | ENSGMOG00000012038 | 9315 | Macropus eugenii | ENSMEUG00000006576 |
59463 | Myotis lucifugus | ENSMLUG00000006097 | 30611 | Otolemur garnettii | ENSOGAG00000009996 |
7757 | Petromyzon marinus | ENSPMAG00000005248 | 132908 | Pteropus vampyrus | ENSPVAG00000012309 |
9823 | Sus scrofa | ENSSSCG00000009101 | 99883 | Tetraodon nigroviridis | ENSTNIG00000005901 |
9739 | Tursiops truncatus | ENSTTRG00000010996 | 8083 | Xiphophorus maculatus | ENSXMAG00000013825 |
9555 | Papio anubis | 101024427 | 9669 | Mustela putorius furo | 101679431 |
9606 | Homo sapiens | 11107 | 28377 | Anolis carolinensis | ENSACAG00000012999 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003050 | 9913 | Bos taurus | ENSBTAG00000012111 |
9615 | Canis familiaris | ENSCAFG00000004179 | 10141 | Cavia porcellus | ENSCPOG00000012883 |
9361 | Dasypus novemcinctus | ENSDNOG00000002009 | 9371 | Echinops telfairi | ENSETEG00000020268 |
9685 | Felis catus | ENSFCAG00000025656 | 9595 | Gorilla gorilla | ENSGGOG00000013562 |
7897 | Latimeria chalumnae | ENSLACG00000009187 | 9785 | Loxodonta africana | ENSLAFG00000006532 |
9103 | Meleagris gallopavo | ENSMGAG00000010710 | 30608 | Microcebus murinus | ENSMICG00000001459 |
9544 | Macaca mulatta | ENSMMUG00000003249 | 9258 | Ornithorhynchus anatinus | ENSOANG00000015109 |
9986 | Oryctolagus cuniculus | ENSOCUG00000013454 | 9978 | Ochotona princeps | ENSOPRG00000011066 |
8090 | Oryzias latipes | ENSORLG00000016247 | 9813 | Procavia capensis | ENSPCAG00000011671 |
13735 | Pelodiscus sinensis | ENSPSIG00000013505 | 9598 | Pan troglodytes | ENSPTRG00000016403 |
10116 | Rattus norvegicus | ENSRNOG00000023679 | 9305 | Sarcophilus harrisii | ENSSHAG00000003250 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000004741 | 37347 | Tupaia belangeri | ENSTBEG00000015386 |
59729 | Taeniopygia guttata | ENSTGUG00000001920 | 31033 | Takifugu rubripes | ENSTRUG00000013850 |
9478 | Tarsius syrichta | ENSTSYG00000009630 | 30538 | Vicugna pacos | ENSVPAG00000007435 |
8364 | Xenopus tropicalis | ENSXETG00000002101 |