Basic Information
Gene ID ENSRNOG00000023679 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Prdm5
Full Name Protein Prdm5
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZRZ9 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 167 199 2.30e-05 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 200 221 3.10e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 222 259 7.80e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 289 318 1.70e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 319 346 6.10e-10 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 347 369 8.30e-12 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 370 393 6.10e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 394 421 3.80e-08 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 422 452 2.90e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 453 477 5.80e-10 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Gene3D G3DSA:3.30.160.60 IPR013087 478 510 1.70e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000009569 Pfam PF00096 IPR007087 199 221 2.90e-03 Zinc finger, C2H2
ENSRNOP00000009569 Pfam PF00096 IPR007087 231 256 1.20e-02 Zinc finger, C2H2
ENSRNOP00000009569 Pfam PF12171 IPR022755 347 367 6.90e-05 Zinc finger, double-stranded RNA binding
ENSRNOP00000009569 PIRSF PIRSF037162 IPR017125 1 514 0.00e-00 PR-domain zinc finger protein PRDM5
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 169 190 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 201 221 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 233 256 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 266 286 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 291 311 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 319 339 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 347 367 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 375 395 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 403 424 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 432 452 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 460 480 - Zinc finger, C2H2
ENSRNOP00000009569 ProSitePatterns PS00028 IPR007087 488 508 - Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 167 195 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 199 221 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 231 261 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 264 286 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 289 316 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 317 344 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 345 372 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 373 400 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 401 429 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 430 457 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 458 485 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50157 IPR007087 486 513 0.00e-00 Zinc finger, C2H2
ENSRNOP00000009569 ProSiteProfiles PS50280 IPR001214 8 124 0.00e-00 SET domain
ENSRNOP00000009569 SMART SM00317 IPR001214 8 130 9.90e-07 SET domain
ENSRNOP00000009569 SMART SM00355 IPR015880 167 190 1.20e-05 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 199 221 3.60e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 231 256 1.60e-05 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 264 286 6.60e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 289 311 1.00e-05 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 317 339 3.00e-04 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 345 367 6.50e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 373 395 6.10e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 401 424 3.90e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 430 452 3.50e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 458 480 8.00e-06 Zinc finger, C2H2-like
ENSRNOP00000009569 SMART SM00355 IPR015880 486 508 8.20e-07 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000009569 PF00096 0 zf-C2H2 Zinc finger, C2H2 type
ENSRNOP00000009569 PF13465 0 zf-H2C2_2 Zinc-finger double domain
ENSRNOP00000009569 PF13894 3.50325e-43 zf-C2H2_4 C2H2-type zinc finger
ENSRNOP00000009569 PF12171 2.5e-30 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
ENSRNOP00000009569 PF12874 1.2e-18 zf-met Zinc-finger of C2H2 type
ENSRNOP00000009569 PF13912 2.3e-16 zf-C2H2_6 C2H2-type zinc finger
ENSRNOP00000009569 PF05605 1.1e-08 zf-Di19 Drought induced 19 protein (Di19), zinc-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000009569 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000009569 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000009569 GO:0005634 cellular_component nucleus
ENSRNOP00000009569 GO:0003677 molecular_function DNA binding
ENSRNOP00000009569 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
61853 Nomascus leucogenys 100583964 8128 Oreochromis niloticus 100697757
9606 Homo sapiens 11107 9913 Bos taurus ENSBTAG00000012111
9615 Canis familiaris ENSCAFG00000004179 9371 Echinops telfairi ENSETEG00000020268
9685 Felis catus ENSFCAG00000025656 7897 Latimeria chalumnae ENSLACG00000009187
9785 Loxodonta africana ENSLAFG00000006532 9103 Meleagris gallopavo ENSMGAG00000010710
30608 Microcebus murinus ENSMICG00000001459 9544 Macaca mulatta ENSMMUG00000003249
9258 Ornithorhynchus anatinus ENSOANG00000015109 9986 Oryctolagus cuniculus ENSOCUG00000013454
9978 Ochotona princeps ENSOPRG00000011066 8090 Oryzias latipes ENSORLG00000016247
9597 Pan paniscus 100970427 9555 Papio anubis 101024427
39432 Saimiri boliviensis 101050996 9669 Mustela putorius furo 101679431
28377 Anolis carolinensis ENSACAG00000012999 9646 Ailuropoda melanoleuca ENSAMEG00000003050
9358 Choloepus hoffmanni ENSCHOG00000007801 10141 Cavia porcellus ENSCPOG00000012883
7955 Danio rerio ENSDARG00000006288 9361 Dasypus novemcinctus ENSDNOG00000002009
10020 Dipodomys ordii ENSDORG00000007739 9796 Equus caballus ENSECAG00000011516
9365 Erinaceus europaeus ENSEEUG00000010306 9595 Gorilla gorilla ENSGGOG00000013562
8049 Gadus morhua ENSGMOG00000012038 9315 Macropus eugenii ENSMEUG00000006576
59463 Myotis lucifugus ENSMLUG00000006097 30611 Otolemur garnettii ENSOGAG00000009996
9813 Procavia capensis ENSPCAG00000011671 7757 Petromyzon marinus ENSPMAG00000005248
13735 Pelodiscus sinensis ENSPSIG00000013505 9598 Pan troglodytes ENSPTRG00000016403
132908 Pteropus vampyrus ENSPVAG00000012309 9823 Sus scrofa ENSSSCG00000009101
43179 Ictidomys tridecemlineatus ENSSTOG00000004741 59729 Taeniopygia guttata ENSTGUG00000001920
99883 Tetraodon nigroviridis ENSTNIG00000005901 31033 Takifugu rubripes ENSTRUG00000013850
9739 Tursiops truncatus ENSTTRG00000010996 8083 Xiphophorus maculatus ENSXMAG00000013825
9305 Sarcophilus harrisii ENSSHAG00000003250 37347 Tupaia belangeri ENSTBEG00000015386
9478 Tarsius syrichta ENSTSYG00000009630 30538 Vicugna pacos ENSVPAG00000007435
8364 Xenopus tropicalis ENSXETG00000002101