Basic Information | |||
Gene ID | ENSDARG00000006288 | ||
Gene Name | prdm5 | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1Q8J8 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 262 | 287 | 3.20e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 324 | 353 | 9.60e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 354 | 381 | 5.80e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 382 | 404 | 6.80e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 405 | 428 | 3.60e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 429 | 456 | 5.10e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 457 | 488 | 1.40e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 489 | 513 | 7.30e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 514 | 546 | 7.30e-18 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 547 | 571 | 6.50e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 572 | 600 | 1.10e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 607 | 630 | 2.90e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSDARP00000106969 | Pfam | PF00096 | IPR007087 | 202 | 224 | 1.70e-02 | Zinc finger, C2H2 |
ENSDARP00000106969 | Pfam | PF00096 | IPR007087 | 266 | 289 | 2.90e-03 | Zinc finger, C2H2 |
ENSDARP00000106969 | Pfam | PF00096 | IPR007087 | 607 | 629 | 1.10e-03 | Zinc finger, C2H2 |
ENSDARP00000106969 | PIRSF | PIRSF037162 | IPR017125 | 3 | 634 | 0.00e-00 | PR-domain zinc finger protein PRDM5 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 171 | 192 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 268 | 291 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 301 | 321 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 326 | 346 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 354 | 374 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 382 | 402 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 410 | 430 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 438 | 459 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 467 | 487 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 495 | 515 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 523 | 543 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 551 | 571 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 579 | 599 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSitePatterns | PS00028 | IPR007087 | 608 | 629 | - | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 169 | 197 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 202 | 231 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 238 | 265 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 266 | 296 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 299 | 321 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 324 | 351 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 352 | 379 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 380 | 407 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 408 | 435 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 436 | 464 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 465 | 492 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 493 | 520 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 521 | 548 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 549 | 576 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 577 | 604 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50157 | IPR007087 | 606 | 634 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000106969 | ProSiteProfiles | PS50280 | IPR001214 | 10 | 126 | 0.00e-00 | SET domain |
ENSDARP00000106969 | SMART | SM00317 | IPR001214 | 10 | 132 | 2.90e-06 | SET domain |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 169 | 192 | 1.10e-04 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 202 | 223 | 2.30e-03 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 238 | 258 | 1.50e-01 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 266 | 291 | 2.00e-05 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 299 | 321 | 5.50e-06 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 324 | 346 | 8.00e-06 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 352 | 374 | 3.00e-04 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 380 | 402 | 7.70e-05 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 408 | 430 | 5.40e-06 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 436 | 459 | 9.70e-07 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 465 | 487 | 4.50e-06 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 493 | 515 | 1.40e-05 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 521 | 543 | 2.40e-07 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 549 | 571 | 5.90e-08 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 577 | 599 | 3.80e-05 | Zinc finger, C2H2-like |
ENSDARP00000106969 | SMART | SM00355 | IPR015880 | 606 | 629 | 1.20e-04 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000106969 | PF00096 | 0 | zf-C2H2 | Zinc finger, C2H2 type |
ENSDARP00000106969 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
ENSDARP00000106969 | PF13894 | 0 | zf-C2H2_4 | C2H2-type zinc finger |
ENSDARP00000106969 | PF12171 | 1.5e-35 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSDARP00000106969 | PF12874 | 2.7e-26 | zf-met | Zinc-finger of C2H2 type |
ENSDARP00000106969 | PF13912 | 2.8e-18 | zf-C2H2_6 | C2H2-type zinc finger |
ENSDARP00000106969 | PF05605 | 2.9e-06 | zf-Di19 | Drought induced 19 protein (Di19), zinc-binding |
ENSDARP00000106969 | PF05495 | 0.00061 | zf-CHY | CHY zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000106969 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000106969 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSDARP00000106969 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000106969 | GO:0003677 | molecular_function | DNA binding |
ENSDARP00000106969 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
61853 | Nomascus leucogenys | 100583964 | 8128 | Oreochromis niloticus | 100697757 |
9597 | Pan paniscus | 100970427 | 9555 | Papio anubis | 101024427 |
9669 | Mustela putorius furo | 101679431 | 9606 | Homo sapiens | 11107 |
28377 | Anolis carolinensis | ENSACAG00000012999 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003050 |
9913 | Bos taurus | ENSBTAG00000012111 | 9615 | Canis familiaris | ENSCAFG00000004179 |
10141 | Cavia porcellus | ENSCPOG00000012883 | 39432 | Saimiri boliviensis | 101050996 |
9358 | Choloepus hoffmanni | ENSCHOG00000007801 | 10020 | Dipodomys ordii | ENSDORG00000007739 |
9796 | Equus caballus | ENSECAG00000011516 | 9365 | Erinaceus europaeus | ENSEEUG00000010306 |
8049 | Gadus morhua | ENSGMOG00000012038 | 9315 | Macropus eugenii | ENSMEUG00000006576 |
59463 | Myotis lucifugus | ENSMLUG00000006097 | 30611 | Otolemur garnettii | ENSOGAG00000009996 |
132908 | Pteropus vampyrus | ENSPVAG00000012309 | 99883 | Tetraodon nigroviridis | ENSTNIG00000005901 |
9739 | Tursiops truncatus | ENSTTRG00000010996 | 9361 | Dasypus novemcinctus | ENSDNOG00000002009 |
9371 | Echinops telfairi | ENSETEG00000020268 | 9685 | Felis catus | ENSFCAG00000025656 |
9595 | Gorilla gorilla | ENSGGOG00000013562 | 7897 | Latimeria chalumnae | ENSLACG00000009187 |
9785 | Loxodonta africana | ENSLAFG00000006532 | 9103 | Meleagris gallopavo | ENSMGAG00000010710 |
30608 | Microcebus murinus | ENSMICG00000001459 | 9544 | Macaca mulatta | ENSMMUG00000003249 |
9258 | Ornithorhynchus anatinus | ENSOANG00000015109 | 9986 | Oryctolagus cuniculus | ENSOCUG00000013454 |
9978 | Ochotona princeps | ENSOPRG00000011066 | 8090 | Oryzias latipes | ENSORLG00000016247 |
9813 | Procavia capensis | ENSPCAG00000011671 | 7757 | Petromyzon marinus | ENSPMAG00000005248 |
13735 | Pelodiscus sinensis | ENSPSIG00000013505 | 9598 | Pan troglodytes | ENSPTRG00000016403 |
10116 | Rattus norvegicus | ENSRNOG00000023679 | 9305 | Sarcophilus harrisii | ENSSHAG00000003250 |
9823 | Sus scrofa | ENSSSCG00000009101 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000004741 |
37347 | Tupaia belangeri | ENSTBEG00000015386 | 59729 | Taeniopygia guttata | ENSTGUG00000001920 |
31033 | Takifugu rubripes | ENSTRUG00000013850 | 9478 | Tarsius syrichta | ENSTSYG00000009630 |
30538 | Vicugna pacos | ENSVPAG00000007435 | 8364 | Xenopus tropicalis | ENSXETG00000002101 |
8083 | Xiphophorus maculatus | ENSXMAG00000013825 |