Basic Information | |||
Gene ID | ENSSTOG00000004741 | ||
Gene Name | PRDM5 | ||
Full Name | Uncharacterized protein | ||
Organism | Ictidomys tridecemlineatus [43179] |
Cross Reference | |||
UniProt | I3M4T9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSTOP00000004269 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 136 | 165 | 1.00e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000004269 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 166 | 202 | 5.00e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000004269 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 233 | 262 | 2.30e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000004269 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 263 | 284 | 4.70e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000004269 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 285 | 309 | 5.50e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSTOP00000004269 | Pfam | PF00096 | IPR007087 | 143 | 165 | 4.70e-04 | Zinc finger, C2H2 |
ENSSTOP00000004269 | Pfam | PF00096 | IPR007087 | 175 | 200 | 3.50e-03 | Zinc finger, C2H2 |
ENSSTOP00000004269 | Pfam | PF00096 | IPR007087 | 209 | 230 | 7.90e-03 | Zinc finger, C2H2 |
ENSSTOP00000004269 | Pfam | PF12171 | IPR022755 | 289 | 309 | 3.10e-05 | Zinc finger, double-stranded RNA binding |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 113 | 134 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 145 | 165 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 177 | 200 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 210 | 230 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 235 | 255 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSitePatterns | PS00028 | IPR007087 | 263 | 283 | - | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 111 | 139 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 143 | 165 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 175 | 205 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 208 | 230 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 233 | 260 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 261 | 288 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50157 | IPR007087 | 289 | 309 | 0.00e-00 | Zinc finger, C2H2 |
ENSSTOP00000004269 | ProSiteProfiles | PS50280 | IPR001214 | 1 | 68 | 0.00e-00 | SET domain |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 111 | 134 | 1.50e-04 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 143 | 165 | 1.90e-06 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 175 | 200 | 8.00e-05 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 208 | 230 | 4.10e-06 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 233 | 255 | 2.90e-05 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 261 | 283 | 1.50e-04 | Zinc finger, C2H2-like |
ENSSTOP00000004269 | SMART | SM00355 | IPR015880 | 289 | 309 | 3.60e-02 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSTOP00000004269 | PF13894 | 4.1e-24 | zf-C2H2_4 | C2H2-type zinc finger |
ENSSTOP00000004269 | PF00096 | 6.8e-23 | zf-C2H2 | Zinc finger, C2H2 type |
ENSSTOP00000004269 | PF13465 | 8.8e-19 | zf-H2C2_2 | Zinc-finger double domain |
ENSSTOP00000004269 | PF12171 | 8.1e-18 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSSTOP00000004269 | PF12874 | 5.2e-13 | zf-met | Zinc-finger of C2H2 type |
ENSSTOP00000004269 | PF13912 | 1.7e-08 | zf-C2H2_6 | C2H2-type zinc finger |
ENSSTOP00000004269 | PF05605 | 0.00041 | zf-Di19 | Drought induced 19 protein (Di19), zinc-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSTOP00000004269 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSSTOP00000004269 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSTOP00000004269 | GO:0005634 | cellular_component | nucleus |
ENSSTOP00000004269 | GO:0003677 | molecular_function | DNA binding |
ENSSTOP00000004269 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
61853 | Nomascus leucogenys | 100583964 | 8128 | Oreochromis niloticus | 100697757 |
9606 | Homo sapiens | 11107 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003050 |
9913 | Bos taurus | ENSBTAG00000012111 | 9615 | Canis familiaris | ENSCAFG00000004179 |
10141 | Cavia porcellus | ENSCPOG00000012883 | 9371 | Echinops telfairi | ENSETEG00000020268 |
9685 | Felis catus | ENSFCAG00000025656 | 9785 | Loxodonta africana | ENSLAFG00000006532 |
9103 | Meleagris gallopavo | ENSMGAG00000010710 | 30608 | Microcebus murinus | ENSMICG00000001459 |
9544 | Macaca mulatta | ENSMMUG00000003249 | 9258 | Ornithorhynchus anatinus | ENSOANG00000015109 |
9986 | Oryctolagus cuniculus | ENSOCUG00000013454 | 9978 | Ochotona princeps | ENSOPRG00000011066 |
9813 | Procavia capensis | ENSPCAG00000011671 | 9598 | Pan troglodytes | ENSPTRG00000016403 |
10116 | Rattus norvegicus | ENSRNOG00000023679 | 9305 | Sarcophilus harrisii | ENSSHAG00000003250 |
9597 | Pan paniscus | 100970427 | 9555 | Papio anubis | 101024427 |
39432 | Saimiri boliviensis | 101050996 | 9669 | Mustela putorius furo | 101679431 |
9358 | Choloepus hoffmanni | ENSCHOG00000007801 | 7955 | Danio rerio | ENSDARG00000006288 |
9361 | Dasypus novemcinctus | ENSDNOG00000002009 | 10020 | Dipodomys ordii | ENSDORG00000007739 |
9796 | Equus caballus | ENSECAG00000011516 | 9365 | Erinaceus europaeus | ENSEEUG00000010306 |
9595 | Gorilla gorilla | ENSGGOG00000013562 | 8049 | Gadus morhua | ENSGMOG00000012038 |
59463 | Myotis lucifugus | ENSMLUG00000006097 | 30611 | Otolemur garnettii | ENSOGAG00000009996 |
7757 | Petromyzon marinus | ENSPMAG00000005248 | 132908 | Pteropus vampyrus | ENSPVAG00000012309 |
42254 | Sorex araneus | ENSSARG00000014129 | 9823 | Sus scrofa | ENSSSCG00000009101 |
59729 | Taeniopygia guttata | ENSTGUG00000001920 | 9739 | Tursiops truncatus | ENSTTRG00000010996 |
37347 | Tupaia belangeri | ENSTBEG00000015386 | 9478 | Tarsius syrichta | ENSTSYG00000009630 |
30538 | Vicugna pacos | ENSVPAG00000007435 | 8364 | Xenopus tropicalis | ENSXETG00000002101 |