Basic Information | |||
Gene ID | ENSXETG00000002101 | ||
Gene Name | prdm5 | ||
Full Name | Uncharacterized protein | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F6PYH5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 259 | 291 | 1.60e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 321 | 350 | 4.40e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 351 | 378 | 5.00e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 379 | 401 | 2.10e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 402 | 424 | 5.70e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 425 | 453 | 8.00e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 454 | 482 | 1.60e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 501 | 519 | 8.30e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 520 | 545 | 4.60e-15 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 546 | 568 | 8.10e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 569 | 597 | 1.20e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 604 | 627 | 3.90e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000004492 | Pfam | PF00096 | IPR007087 | 200 | 221 | 3.90e-03 | Zinc finger, C2H2 |
ENSXETP00000004492 | Pfam | PF00096 | IPR007087 | 235 | 256 | 2.20e-02 | Zinc finger, C2H2 |
ENSXETP00000004492 | Pfam | PF00096 | IPR007087 | 263 | 288 | 1.70e-03 | Zinc finger, C2H2 |
ENSXETP00000004492 | PIRSF | PIRSF037162 | IPR017125 | 1 | 631 | 0.00e-00 | PR-domain zinc finger protein PRDM5 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 170 | 191 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 265 | 288 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 298 | 318 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 323 | 343 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 351 | 371 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 379 | 399 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 407 | 427 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 435 | 456 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 520 | 540 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 548 | 568 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 576 | 596 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSitePatterns | PS00028 | IPR007087 | 605 | 626 | - | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 168 | 196 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 200 | 218 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 235 | 262 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 263 | 293 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 296 | 318 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 321 | 348 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 349 | 376 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 377 | 404 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 405 | 432 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 433 | 461 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 462 | 490 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 518 | 545 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 546 | 573 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 574 | 601 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50157 | IPR007087 | 603 | 631 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000004492 | ProSiteProfiles | PS50280 | IPR001214 | 8 | 124 | 0.00e-00 | SET domain |
ENSXETP00000004492 | SMART | SM00317 | IPR001214 | 8 | 130 | 1.90e-07 | SET domain |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 168 | 191 | 3.10e-05 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 200 | 220 | 2.80e-02 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 235 | 255 | 5.00e-02 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 263 | 288 | 2.00e-05 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 296 | 318 | 1.30e-05 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 321 | 343 | 2.20e-07 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 349 | 371 | 5.20e-04 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 377 | 399 | 6.50e-06 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 405 | 427 | 5.40e-06 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 433 | 456 | 9.70e-07 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 462 | 482 | 3.00e-02 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 518 | 540 | 2.40e-07 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 546 | 568 | 5.80e-08 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 574 | 596 | 3.80e-05 | Zinc finger, C2H2-like |
ENSXETP00000004492 | SMART | SM00355 | IPR015880 | 603 | 626 | 1.90e-04 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000004492 | PF00096 | 0 | zf-C2H2 | Zinc finger, C2H2 type |
ENSXETP00000004492 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
ENSXETP00000004492 | PF13894 | 0 | zf-C2H2_4 | C2H2-type zinc finger |
ENSXETP00000004492 | PF12171 | 4.5e-27 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSXETP00000004492 | PF12874 | 1.9e-25 | zf-met | Zinc-finger of C2H2 type |
ENSXETP00000004492 | PF13912 | 6.4e-18 | zf-C2H2_6 | C2H2-type zinc finger |
ENSXETP00000004492 | PF05605 | 1e-05 | zf-Di19 | Drought induced 19 protein (Di19), zinc-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000004492 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000004492 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000004492 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000004492 | GO:0003677 | molecular_function | DNA binding |
ENSXETP00000004492 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
61853 | Nomascus leucogenys | 100583964 | 9606 | Homo sapiens | 11107 |
9913 | Bos taurus | ENSBTAG00000012111 | 9371 | Echinops telfairi | ENSETEG00000020268 |
9785 | Loxodonta africana | ENSLAFG00000006532 | 9544 | Macaca mulatta | ENSMMUG00000003249 |
9258 | Ornithorhynchus anatinus | ENSOANG00000015109 | 9978 | Ochotona princeps | ENSOPRG00000011066 |
8090 | Oryzias latipes | ENSORLG00000016247 | 9478 | Tarsius syrichta | ENSTSYG00000009630 |
8128 | Oreochromis niloticus | 100697757 | 9597 | Pan paniscus | 100970427 |
9555 | Papio anubis | 101024427 | 39432 | Saimiri boliviensis | 101050996 |
9669 | Mustela putorius furo | 101679431 | 28377 | Anolis carolinensis | ENSACAG00000012999 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003050 | 9615 | Canis familiaris | ENSCAFG00000004179 |
9358 | Choloepus hoffmanni | ENSCHOG00000007801 | 10141 | Cavia porcellus | ENSCPOG00000012883 |
7955 | Danio rerio | ENSDARG00000006288 | 9361 | Dasypus novemcinctus | ENSDNOG00000002009 |
10020 | Dipodomys ordii | ENSDORG00000007739 | 9796 | Equus caballus | ENSECAG00000011516 |
9365 | Erinaceus europaeus | ENSEEUG00000010306 | 9685 | Felis catus | ENSFCAG00000025656 |
9595 | Gorilla gorilla | ENSGGOG00000013562 | 8049 | Gadus morhua | ENSGMOG00000012038 |
7897 | Latimeria chalumnae | ENSLACG00000009187 | 9315 | Macropus eugenii | ENSMEUG00000006576 |
9103 | Meleagris gallopavo | ENSMGAG00000010710 | 30608 | Microcebus murinus | ENSMICG00000001459 |
59463 | Myotis lucifugus | ENSMLUG00000006097 | 9986 | Oryctolagus cuniculus | ENSOCUG00000013454 |
30611 | Otolemur garnettii | ENSOGAG00000009996 | 9813 | Procavia capensis | ENSPCAG00000011671 |
7757 | Petromyzon marinus | ENSPMAG00000005248 | 13735 | Pelodiscus sinensis | ENSPSIG00000013505 |
9598 | Pan troglodytes | ENSPTRG00000016403 | 132908 | Pteropus vampyrus | ENSPVAG00000012309 |
10116 | Rattus norvegicus | ENSRNOG00000023679 | 9305 | Sarcophilus harrisii | ENSSHAG00000003250 |
9823 | Sus scrofa | ENSSSCG00000009101 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000004741 |
37347 | Tupaia belangeri | ENSTBEG00000015386 | 59729 | Taeniopygia guttata | ENSTGUG00000001920 |
99883 | Tetraodon nigroviridis | ENSTNIG00000005901 | 31033 | Takifugu rubripes | ENSTRUG00000013850 |
9739 | Tursiops truncatus | ENSTTRG00000010996 | 30538 | Vicugna pacos | ENSVPAG00000007435 |
8083 | Xiphophorus maculatus | ENSXMAG00000013825 |