Basic Information | |||
Gene ID | 100973066 | ||
Gene Name | LHX3 | ||
Full Name | PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003816999 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 168 | 225 | 1.40e-20 | Homeodomain-like |
XP_003816999 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 29 | 92 | 3.50e-17 | Zinc finger, LIM-type |
XP_003816999 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 93 | 146 | 2.30e-14 | Zinc finger, LIM-type |
XP_003816999 | Pfam | PF00046 | IPR001356 | 168 | 218 | 1.50e-17 | Homeobox domain |
XP_003816999 | Pfam | PF00412 | IPR001781 | 31 | 86 | 3.20e-15 | Zinc finger, LIM-type |
XP_003816999 | Pfam | PF00412 | IPR001781 | 90 | 147 | 6.00e-16 | Zinc finger, LIM-type |
XP_003816999 | ProSitePatterns | PS00027 | IPR017970 | 194 | 217 | - | Homeobox, conserved site |
XP_003816999 | ProSitePatterns | PS00478 | IPR001781 | 31 | 65 | - | Zinc finger, LIM-type |
XP_003816999 | ProSitePatterns | PS00478 | IPR001781 | 90 | 125 | - | Zinc finger, LIM-type |
XP_003816999 | ProSiteProfiles | PS50023 | IPR001781 | 29 | 88 | 0.00e-00 | Zinc finger, LIM-type |
XP_003816999 | ProSiteProfiles | PS50023 | IPR001781 | 89 | 151 | 0.00e-00 | Zinc finger, LIM-type |
XP_003816999 | ProSiteProfiles | PS50071 | IPR001356 | 159 | 219 | 0.00e-00 | Homeobox domain |
XP_003816999 | SMART | SM00132 | IPR001781 | 30 | 81 | 5.40e-20 | Zinc finger, LIM-type |
XP_003816999 | SMART | SM00132 | IPR001781 | 89 | 144 | 3.10e-19 | Zinc finger, LIM-type |
XP_003816999 | SMART | SM00389 | IPR001356 | 153 | 223 | 1.70e-19 | Homeobox domain |
XP_003816999 | SUPERFAMILY | SSF46689 | IPR009057 | 167 | 223 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003816999 | PF00412 | 1.4e-31 | LIM | LIM domain |
XP_003816999 | PF00046 | 7.1e-18 | Homeobox | Homeobox domain |
XP_003816999 | PF05920 | 0.00074 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003816999 | GO:0005634 | cellular_component | nucleus |
XP_003816999 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003816999 | GO:0008270 | molecular_function | zinc ion binding |
XP_003816999 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016250 | 7029 | Acyrthosiphon pisum | 100164426 |
9601 | Pongo abelii | 100442936 | 9785 | Loxodonta africana | 100657028 |
8128 | Oreochromis niloticus | 100693378 | 10029 | Cricetulus griseus | 100758218 |
9305 | Sarcophilus harrisii | 100929025 | 30611 | Otolemur garnettii | 100944641 |
39432 | Saimiri boliviensis | 101040320 | 9365 | Erinaceus europaeus | ENSEEUG00000014517 |
8090 | Oryzias latipes | ENSORLG00000006699 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018735 | 8364 | Xenopus tropicalis | ENSXETG00000000726 |
9555 | Papio anubis | 100999398 | 31033 | Takifugu rubripes | 101064401 |
8083 | Xiphophorus maculatus | 102236864 | 9913 | Bos taurus | 539213 |
9598 | Pan troglodytes | 746333 | 9606 | Homo sapiens | 8022 |
28377 | Anolis carolinensis | ENSACAG00000015639 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 |
9615 | Canis familiaris | ENSCAFG00000019695 | 9796 | Equus caballus | ENSECAG00000021983 |
69293 | Gasterosteus aculeatus | ENSGACG00000016592 | 8049 | Gadus morhua | ENSGMOG00000015270 |
7897 | Latimeria chalumnae | ENSLACG00000016988 | 9315 | Macropus eugenii | ENSMEUG00000008096 |
9103 | Meleagris gallopavo | ENSMGAG00000003074 | 9813 | Procavia capensis | ENSPCAG00000016565 |
13735 | Pelodiscus sinensis | ENSPSIG00000008129 | 132908 | Pteropus vampyrus | ENSPVAG00000002969 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005001 | 9739 | Tursiops truncatus | ENSTTRG00000007569 |