Basic Information | |||
Gene ID | 100016250 | ||
Gene Name | LHX3 | ||
Full Name | Uncharacterized protein | ||
Organism | Monodelphis domestica [13616] |
Cross Reference | |||
UniProt | F7E0Z8 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | mdo:100016250 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSMODP00000021892 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 162 | 224 | 5.20e-23 | Homeodomain-like |
ENSMODP00000021892 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 31 | 97 | 6.10e-18 | Zinc finger, LIM-type |
ENSMODP00000021892 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 98 | 149 | 5.30e-15 | Zinc finger, LIM-type |
ENSMODP00000021892 | Pfam | PF00046 | IPR001356 | 161 | 217 | 7.90e-21 | Homeobox domain |
ENSMODP00000021892 | Pfam | PF00412 | IPR001781 | 34 | 89 | 1.90e-15 | Zinc finger, LIM-type |
ENSMODP00000021892 | Pfam | PF00412 | IPR001781 | 93 | 150 | 9.60e-17 | Zinc finger, LIM-type |
ENSMODP00000021892 | ProSitePatterns | PS00027 | IPR017970 | 193 | 216 | - | Homeobox, conserved site |
ENSMODP00000021892 | ProSitePatterns | PS00478 | IPR001781 | 34 | 68 | - | Zinc finger, LIM-type |
ENSMODP00000021892 | ProSitePatterns | PS00478 | IPR001781 | 93 | 128 | - | Zinc finger, LIM-type |
ENSMODP00000021892 | ProSiteProfiles | PS50023 | IPR001781 | 32 | 91 | 0.00e-00 | Zinc finger, LIM-type |
ENSMODP00000021892 | ProSiteProfiles | PS50023 | IPR001781 | 92 | 154 | 0.00e-00 | Zinc finger, LIM-type |
ENSMODP00000021892 | ProSiteProfiles | PS50071 | IPR001356 | 158 | 218 | 0.00e-00 | Homeobox domain |
ENSMODP00000021892 | SMART | SM00132 | IPR001781 | 33 | 84 | 1.80e-19 | Zinc finger, LIM-type |
ENSMODP00000021892 | SMART | SM00132 | IPR001781 | 92 | 147 | 1.20e-19 | Zinc finger, LIM-type |
ENSMODP00000021892 | SMART | SM00389 | IPR001356 | 160 | 222 | 2.30e-25 | Homeobox domain |
ENSMODP00000021892 | SUPERFAMILY | SSF46689 | IPR009057 | 156 | 220 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSMODP00000021892 | PF00412 | 1.4e-32 | LIM | LIM domain |
ENSMODP00000021892 | PF00046 | 4.7e-21 | Homeobox | Homeobox domain |
ENSMODP00000021892 | PF05920 | 0.00026 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSMODP00000021892 | GO:0005634 | cellular_component | nucleus |
ENSMODP00000021892 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSMODP00000021892 | GO:0008270 | molecular_function | zinc ion binding |
ENSMODP00000021892 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100120126 | 7029 | Acyrthosiphon pisum | 100164426 |
10224 | Saccoglossus kowalevskii | 100303523 | 9601 | Pongo abelii | 100442936 |
400682 | Amphimedon queenslandica | 100634938 | 30195 | Bombus terrestris | 100648335 |
8128 | Oreochromis niloticus | 100693378 | 132113 | Bombus impatiens | 100750204 |
10029 | Cricetulus griseus | 100758218 | 34638 | Metaseiulus occidentalis | 100903153 |
9305 | Sarcophilus harrisii | 100929025 | 30611 | Otolemur garnettii | 100944641 |
9597 | Pan paniscus | 100973066 | 9555 | Papio anubis | 100999398 |
39432 | Saimiri boliviensis | 101040320 | 31033 | Takifugu rubripes | 101064401 |
6239 | Caenorhabditis elegans | 181012 | 7227 | Drosophila melanogaster | 35184 |
9913 | Bos taurus | 539213 | 7668 | Strongylocentrotus purpuratus | 575191 |
7070 | Tribolium castaneum | 662120 | 9598 | Pan troglodytes | 746333 |
9606 | Homo sapiens | 8022 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 |
7719 | Ciona intestinalis | ENSCING00000009072 | 7955 | Danio rerio | ENSDARG00000003803 |
9796 | Equus caballus | ENSECAG00000021983 | 9365 | Erinaceus europaeus | ENSEEUG00000014517 |
7897 | Latimeria chalumnae | ENSLACG00000016988 | 9315 | Macropus eugenii | ENSMEUG00000008096 |
8090 | Oryzias latipes | ENSORLG00000006699 | 13735 | Pelodiscus sinensis | ENSPSIG00000008129 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005001 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018735 | 9739 | Tursiops truncatus | ENSTTRG00000007569 |
8364 | Xenopus tropicalis | ENSXETG00000000726 | 9785 | Loxodonta africana | 100657028 |
8083 | Xiphophorus maculatus | 102236864 | 28377 | Anolis carolinensis | ENSACAG00000015639 |
9615 | Canis familiaris | ENSCAFG00000019695 | 69293 | Gasterosteus aculeatus | ENSGACG00000016592 |
8049 | Gadus morhua | ENSGMOG00000015270 | 9103 | Meleagris gallopavo | ENSMGAG00000003074 |
9813 | Procavia capensis | ENSPCAG00000016565 | 132908 | Pteropus vampyrus | ENSPVAG00000002969 |