Basic Information | |||
Gene ID | 100929025 | ||
Gene Name | LHX3 | ||
Full Name | Uncharacterized protein | ||
Organism | Sarcophilus harrisii [9305] |
Cross Reference | |||
UniProt | G3WDD4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | shr:100929025 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSHAP00000013439 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 164 | 226 | 5.20e-23 | Homeodomain-like |
ENSSHAP00000013439 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 100 | 151 | 6.20e-15 | Zinc finger, LIM-type |
ENSSHAP00000013439 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 34 | 99 | 8.00e-18 | Zinc finger, LIM-type |
ENSSHAP00000013439 | Pfam | PF00046 | IPR001356 | 163 | 219 | 7.90e-21 | Homeobox domain |
ENSSHAP00000013439 | Pfam | PF00412 | IPR001781 | 36 | 91 | 2.00e-15 | Zinc finger, LIM-type |
ENSSHAP00000013439 | Pfam | PF00412 | IPR001781 | 95 | 152 | 9.60e-17 | Zinc finger, LIM-type |
ENSSHAP00000013439 | ProSitePatterns | PS00027 | IPR017970 | 195 | 218 | - | Homeobox, conserved site |
ENSSHAP00000013439 | ProSitePatterns | PS00478 | IPR001781 | 36 | 70 | - | Zinc finger, LIM-type |
ENSSHAP00000013439 | ProSitePatterns | PS00478 | IPR001781 | 95 | 130 | - | Zinc finger, LIM-type |
ENSSHAP00000013439 | ProSiteProfiles | PS50023 | IPR001781 | 34 | 93 | 0.00e-00 | Zinc finger, LIM-type |
ENSSHAP00000013439 | ProSiteProfiles | PS50023 | IPR001781 | 94 | 156 | 0.00e-00 | Zinc finger, LIM-type |
ENSSHAP00000013439 | ProSiteProfiles | PS50071 | IPR001356 | 160 | 220 | 0.00e-00 | Homeobox domain |
ENSSHAP00000013439 | SMART | SM00132 | IPR001781 | 35 | 86 | 1.80e-19 | Zinc finger, LIM-type |
ENSSHAP00000013439 | SMART | SM00132 | IPR001781 | 94 | 149 | 1.20e-19 | Zinc finger, LIM-type |
ENSSHAP00000013439 | SMART | SM00389 | IPR001356 | 162 | 224 | 2.30e-25 | Homeobox domain |
ENSSHAP00000013439 | SUPERFAMILY | SSF46689 | IPR009057 | 158 | 222 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSHAP00000013439 | PF00412 | 1.4e-32 | LIM | LIM domain |
ENSSHAP00000013439 | PF00046 | 4.5e-21 | Homeobox | Homeobox domain |
ENSSHAP00000013439 | PF05920 | 0.00026 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSHAP00000013439 | GO:0005634 | cellular_component | nucleus |
ENSSHAP00000013439 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSSHAP00000013439 | GO:0008270 | molecular_function | zinc ion binding |
ENSSHAP00000013439 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016250 | 7425 | Nasonia vitripennis | 100120126 |
7029 | Acyrthosiphon pisum | 100164426 | 10224 | Saccoglossus kowalevskii | 100303523 |
9483 | Callithrix jacchus | 100414118 | 400682 | Amphimedon queenslandica | 100634938 |
9785 | Loxodonta africana | 100657028 | 10029 | Cricetulus griseus | 100758218 |
7463 | Apis florea | 100868114 | 143995 | Megachile rotundata | 100880011 |
34638 | Metaseiulus occidentalis | 100903153 | 9601 | Pongo abelii | 100442936 |
30195 | Bombus terrestris | 100648335 | 8128 | Oreochromis niloticus | 100693378 |
132113 | Bombus impatiens | 100750204 | 30611 | Otolemur garnettii | 100944641 |
9597 | Pan paniscus | 100973066 | 9555 | Papio anubis | 100999398 |
39432 | Saimiri boliviensis | 101040320 | 9031 | Gallus gallus | 776024 |
7719 | Ciona intestinalis | ENSCING00000009072 | 51511 | Ciona savignyi | ENSCSAVG00000000590 |
7955 | Danio rerio | ENSDARG00000003803 | 9796 | Equus caballus | ENSECAG00000021983 |
9365 | Erinaceus europaeus | ENSEEUG00000014517 | 30608 | Microcebus murinus | ENSMICG00000017555 |
8090 | Oryzias latipes | ENSORLG00000006699 | 13735 | Pelodiscus sinensis | ENSPSIG00000008129 |
10116 | Rattus norvegicus | ENSRNOG00000003595 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018735 | 8364 | Xenopus tropicalis | ENSXETG00000000726 |
31033 | Takifugu rubripes | 101064401 | 9595 | Gorilla gorilla | 101146924 |
9669 | Mustela putorius furo | 101675371 | 8083 | Xiphophorus maculatus | 102236864 |
59463 | Myotis lucifugus | 102430726 | 6239 | Caenorhabditis elegans | 181012 |
7227 | Drosophila melanogaster | 35184 | 9913 | Bos taurus | 539213 |
7668 | Strongylocentrotus purpuratus | 575191 | 7070 | Tribolium castaneum | 662120 |
7460 | Apis mellifera | 724778 | 9598 | Pan troglodytes | 746333 |
9606 | Homo sapiens | 8022 | 28377 | Anolis carolinensis | ENSACAG00000015639 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 | 9615 | Canis familiaris | ENSCAFG00000019695 |
10020 | Dipodomys ordii | ENSDORG00000014432 | 9685 | Felis catus | ENSFCAG00000005479 |
69293 | Gasterosteus aculeatus | ENSGACG00000016592 | 8049 | Gadus morhua | ENSGMOG00000015270 |
7897 | Latimeria chalumnae | ENSLACG00000016988 | 9315 | Macropus eugenii | ENSMEUG00000008096 |
9103 | Meleagris gallopavo | ENSMGAG00000003074 | 9544 | Macaca mulatta | ENSMMUG00000012050 |
61853 | Nomascus leucogenys | ENSNLEG00000015953 | 9258 | Ornithorhynchus anatinus | ENSOANG00000000969 |
9978 | Ochotona princeps | ENSOPRG00000009780 | 9813 | Procavia capensis | ENSPCAG00000016565 |
132908 | Pteropus vampyrus | ENSPVAG00000002969 | 9823 | Sus scrofa | ENSSSCG00000015536 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005001 | 9739 | Tursiops truncatus | ENSTTRG00000007569 |
30538 | Vicugna pacos | ENSVPAG00000010060 |