Basic Information | |||
Gene ID | 102236864 | ||
Gene Name | LHX3 | ||
Full Name | Uncharacterized protein | ||
Organism | Xiphophorus maculatus [8083] |
Cross Reference | |||
UniProt | M4AA42 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXMAP00000011336 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 156 | 218 | 5.20e-23 | Homeodomain-like |
ENSXMAP00000011336 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 25 | 91 | 7.60e-18 | Zinc finger, LIM-type |
ENSXMAP00000011336 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 92 | 143 | 6.90e-15 | Zinc finger, LIM-type |
ENSXMAP00000011336 | Pfam | PF00046 | IPR001356 | 155 | 211 | 7.80e-21 | Homeobox domain |
ENSXMAP00000011336 | Pfam | PF00412 | IPR001781 | 28 | 83 | 9.80e-15 | Zinc finger, LIM-type |
ENSXMAP00000011336 | Pfam | PF00412 | IPR001781 | 87 | 144 | 1.50e-16 | Zinc finger, LIM-type |
ENSXMAP00000011336 | ProSitePatterns | PS00027 | IPR017970 | 187 | 210 | - | Homeobox, conserved site |
ENSXMAP00000011336 | ProSitePatterns | PS00478 | IPR001781 | 28 | 62 | - | Zinc finger, LIM-type |
ENSXMAP00000011336 | ProSitePatterns | PS00478 | IPR001781 | 87 | 122 | - | Zinc finger, LIM-type |
ENSXMAP00000011336 | ProSiteProfiles | PS50023 | IPR001781 | 26 | 85 | 0.00e-00 | Zinc finger, LIM-type |
ENSXMAP00000011336 | ProSiteProfiles | PS50023 | IPR001781 | 86 | 148 | 0.00e-00 | Zinc finger, LIM-type |
ENSXMAP00000011336 | ProSiteProfiles | PS50071 | IPR001356 | 152 | 212 | 0.00e-00 | Homeobox domain |
ENSXMAP00000011336 | SMART | SM00132 | IPR001781 | 27 | 78 | 1.20e-19 | Zinc finger, LIM-type |
ENSXMAP00000011336 | SMART | SM00132 | IPR001781 | 86 | 141 | 2.10e-19 | Zinc finger, LIM-type |
ENSXMAP00000011336 | SMART | SM00389 | IPR001356 | 154 | 216 | 2.30e-25 | Homeobox domain |
ENSXMAP00000011336 | SUPERFAMILY | SSF46689 | IPR009057 | 150 | 214 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXMAP00000011336 | PF00412 | 1.1e-31 | LIM | LIM domain |
ENSXMAP00000011336 | PF00046 | 4.7e-21 | Homeobox | Homeobox domain |
ENSXMAP00000011336 | PF05920 | 0.00026 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXMAP00000011336 | GO:0005634 | cellular_component | nucleus |
ENSXMAP00000011336 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSXMAP00000011336 | GO:0008270 | molecular_function | zinc ion binding |
ENSXMAP00000011336 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016250 | 9601 | Pongo abelii | 100442936 |
400682 | Amphimedon queenslandica | 100634938 | 9785 | Loxodonta africana | 100657028 |
8128 | Oreochromis niloticus | 100693378 | 10029 | Cricetulus griseus | 100758218 |
9305 | Sarcophilus harrisii | 100929025 | 30611 | Otolemur garnettii | 100944641 |
9597 | Pan paniscus | 100973066 | 9555 | Papio anubis | 100999398 |
39432 | Saimiri boliviensis | 101040320 | 31033 | Takifugu rubripes | 101064401 |
6239 | Caenorhabditis elegans | 181012 | 9913 | Bos taurus | 539213 |
7668 | Strongylocentrotus purpuratus | 575191 | 9598 | Pan troglodytes | 746333 |
9606 | Homo sapiens | 8022 | 28377 | Anolis carolinensis | ENSACAG00000015639 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 | 9615 | Canis familiaris | ENSCAFG00000019695 |
7719 | Ciona intestinalis | ENSCING00000009072 | 51511 | Ciona savignyi | ENSCSAVG00000000590 |
7955 | Danio rerio | ENSDARG00000003803 | 9796 | Equus caballus | ENSECAG00000021983 |
9365 | Erinaceus europaeus | ENSEEUG00000014517 | 69293 | Gasterosteus aculeatus | ENSGACG00000016592 |
8049 | Gadus morhua | ENSGMOG00000015270 | 7897 | Latimeria chalumnae | ENSLACG00000016988 |
9315 | Macropus eugenii | ENSMEUG00000008096 | 8090 | Oryzias latipes | ENSORLG00000006699 |
13735 | Pelodiscus sinensis | ENSPSIG00000008129 | 132908 | Pteropus vampyrus | ENSPVAG00000002969 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005001 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018735 | 9739 | Tursiops truncatus | ENSTTRG00000007569 |
8364 | Xenopus tropicalis | ENSXETG00000000726 | 9103 | Meleagris gallopavo | ENSMGAG00000003074 |
9813 | Procavia capensis | ENSPCAG00000016565 |