Basic Information
Gene ID 100984491
Gene Name LMX1B
Full Name PREDICTED: LIM homeobox transcription factor 1-beta [Pan paniscus].
Organism Pan paniscus [9597]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_003808084 Gene3D G3DSA:1.10.10.60 IPR009057 204 271 5.00e-24 Homeodomain-like
XP_003808084 Gene3D G3DSA:2.10.110.10 IPR001781 119 171 4.30e-15 Zinc finger, LIM-type
XP_003808084 Gene3D G3DSA:2.10.110.10 IPR001781 55 118 7.60e-17 Zinc finger, LIM-type
XP_003808084 Pfam PF00046 IPR001356 220 276 1.60e-17 Homeobox domain
XP_003808084 Pfam PF00412 IPR001781 115 172 1.20e-15 Zinc finger, LIM-type
XP_003808084 Pfam PF00412 IPR001781 56 111 2.70e-16 Zinc finger, LIM-type
XP_003808084 ProSitePatterns PS00027 IPR017970 252 275 - Homeobox, conserved site
XP_003808084 ProSitePatterns PS00478 IPR001781 115 150 - Zinc finger, LIM-type
XP_003808084 ProSitePatterns PS00478 IPR001781 56 90 - Zinc finger, LIM-type
XP_003808084 ProSiteProfiles PS50023 IPR001781 114 175 0.00e-00 Zinc finger, LIM-type
XP_003808084 ProSiteProfiles PS50023 IPR001781 54 113 0.00e-00 Zinc finger, LIM-type
XP_003808084 ProSiteProfiles PS50071 IPR001356 217 277 0.00e-00 Homeobox domain
XP_003808084 SMART SM00132 IPR001781 114 168 2.10e-19 Zinc finger, LIM-type
XP_003808084 SMART SM00132 IPR001781 55 106 2.10e-19 Zinc finger, LIM-type
XP_003808084 SMART SM00389 IPR001356 219 281 6.00e-24 Homeobox domain
XP_003808084 SUPERFAMILY SSF46689 IPR009057 208 277 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_003808084 PF00412 2.4e-32 LIM LIM domain
XP_003808084 PF00046 7.2e-18 Homeobox Homeobox domain
XP_003808084 PF05920 0.00013 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_003808084 GO:0006351 biological_process transcription, DNA-templated
XP_003808084 GO:0007275 biological_process multicellular organismal development
XP_003808084 GO:0005634 cellular_component nucleus
XP_003808084 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
XP_003808084 GO:0008270 molecular_function zinc ion binding
XP_003808084 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100328994 30195 Bombus terrestris 100644798
13616 Monodelphis domestica 100016205 7425 Nasonia vitripennis 100121564
8128 Oreochromis niloticus 100696266 132113 Bombus impatiens 100744167
7463 Apis florea 100872112 143995 Megachile rotundata 100879464
34638 Metaseiulus occidentalis 100909136 9555 Papio anubis 101016885
39432 Saimiri boliviensis 101047214 9685 Felis catus 101086098
8090 Oryzias latipes 101159592 7955 Danio rerio 554360
7070 Tribolium castaneum 655586 9615 Canis familiaris ENSCAFG00000030076
7719 Ciona intestinalis ENSCING00000013048 9483 Callithrix jacchus ENSCJAG00000007071
10141 Cavia porcellus ENSCPOG00000023429 10020 Dipodomys ordii ENSDORG00000002371
9365 Erinaceus europaeus ENSEEUG00000007978 9371 Echinops telfairi ENSETEG00000019757
69293 Gasterosteus aculeatus ENSGACG00000012015 9031 Gallus gallus ENSGALG00000000936
8049 Gadus morhua ENSGMOG00000006452 7897 Latimeria chalumnae ENSLACG00000016220
9785 Loxodonta africana ENSLAFG00000015481 30608 Microcebus murinus ENSMICG00000010287
9544 Macaca mulatta ENSMMUG00000002236 61853 Nomascus leucogenys ENSNLEG00000017412
30611 Otolemur garnettii ENSOGAG00000001158 13735 Pelodiscus sinensis ENSPSIG00000005200
9598 Pan troglodytes ENSPTRG00000021377 132908 Pteropus vampyrus ENSPVAG00000004265
9823 Sus scrofa ENSSSCG00000005606 59729 Taeniopygia guttata ENSTGUG00000007409
31033 Takifugu rubripes ENSTRUG00000009042 9739 Tursiops truncatus ENSTTRG00000013199
8364 Xenopus tropicalis ENSXETG00000000742 9669 Mustela putorius furo 101686194
7668 Strongylocentrotus purpuratus 585635 7460 Apis mellifera 724778
9913 Bos taurus ENSBTAG00000010228 9796 Equus caballus ENSECAG00000018605
9315 Macropus eugenii ENSMEUG00000012451 9103 Meleagris gallopavo ENSMGAG00000008601
9978 Ochotona princeps ENSOPRG00000015599 9813 Procavia capensis ENSPCAG00000013608
10116 Rattus norvegicus ENSRNOG00000017019 43179 Ictidomys tridecemlineatus ENSSTOG00000026973
99883 Tetraodon nigroviridis ENSTNIG00000018979 8083 Xiphophorus maculatus ENSXMAG00000000206