Basic Information | |||
Gene ID | ENSECAG00000018605 | ||
Gene Name | LMX1B | ||
Full Name | Uncharacterized protein | ||
Organism | Equus caballus [9796] |
Cross Reference | |||
UniProt | F7AA53 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSECAP00000016414 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 158 | 224 | 4.60e-23 | Homeodomain-like |
ENSECAP00000016414 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 73 | 125 | 2.50e-12 | Zinc finger, LIM-type |
ENSECAP00000016414 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 9 | 72 | 4.10e-15 | Zinc finger, LIM-type |
ENSECAP00000016414 | Pfam | PF00046 | IPR001356 | 174 | 226 | 1.30e-14 | Homeobox domain |
ENSECAP00000016414 | Pfam | PF00412 | IPR001781 | 10 | 64 | 3.00e-16 | Zinc finger, LIM-type |
ENSECAP00000016414 | Pfam | PF00412 | IPR001781 | 69 | 126 | 4.70e-13 | Zinc finger, LIM-type |
ENSECAP00000016414 | ProSitePatterns | PS00027 | IPR017970 | 206 | 229 | - | Homeobox, conserved site |
ENSECAP00000016414 | ProSitePatterns | PS00478 | IPR001781 | 10 | 44 | - | Zinc finger, LIM-type |
ENSECAP00000016414 | ProSiteProfiles | PS50023 | IPR001781 | 68 | 129 | 0.00e-00 | Zinc finger, LIM-type |
ENSECAP00000016414 | ProSiteProfiles | PS50023 | IPR001781 | 8 | 67 | 0.00e-00 | Zinc finger, LIM-type |
ENSECAP00000016414 | ProSiteProfiles | PS50071 | IPR001356 | 171 | 231 | 0.00e-00 | Homeobox domain |
ENSECAP00000016414 | SMART | SM00132 | IPR001781 | 68 | 122 | 4.30e-13 | Zinc finger, LIM-type |
ENSECAP00000016414 | SMART | SM00132 | IPR001781 | 9 | 60 | 1.80e-19 | Zinc finger, LIM-type |
ENSECAP00000016414 | SMART | SM00389 | IPR001356 | 173 | 235 | 8.50e-19 | Homeobox domain |
ENSECAP00000016414 | SUPERFAMILY | SSF46689 | IPR009057 | 160 | 226 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSECAP00000016414 | PF00412 | 1e-29 | LIM | LIM domain |
ENSECAP00000016414 | PF00046 | 6.5e-15 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSECAP00000016414 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSECAP00000016414 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSECAP00000016414 | GO:0007275 | biological_process | multicellular organismal development |
ENSECAP00000016414 | GO:0005634 | cellular_component | nucleus |
ENSECAP00000016414 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSECAP00000016414 | GO:0008270 | molecular_function | zinc ion binding |
ENSECAP00000016414 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100328994 | 30195 | Bombus terrestris | 100644798 |
9595 | Gorilla gorilla | 101151857 | 7668 | Strongylocentrotus purpuratus | 585635 |
7460 | Apis mellifera | 724778 | 9913 | Bos taurus | ENSBTAG00000010228 |
13616 | Monodelphis domestica | 100016205 | 7425 | Nasonia vitripennis | 100121564 |
7029 | Acyrthosiphon pisum | 100166469 | 9986 | Oryctolagus cuniculus | 100338248 |
9646 | Ailuropoda melanoleuca | 100475199 | 8128 | Oreochromis niloticus | 100696266 |
132113 | Bombus impatiens | 100744167 | 10029 | Cricetulus griseus | 100760113 |
7463 | Apis florea | 100872112 | 143995 | Megachile rotundata | 100879464 |
34638 | Metaseiulus occidentalis | 100909136 | 9597 | Pan paniscus | 100984491 |
9555 | Papio anubis | 101016885 | 39432 | Saimiri boliviensis | 101047214 |
9685 | Felis catus | 101086098 | 8090 | Oryzias latipes | 101159592 |
9669 | Mustela putorius furo | 101686194 | 10090 | Mus musculus | 110648 |
7227 | Drosophila melanogaster | 39405 | 7955 | Danio rerio | 554360 |
7070 | Tribolium castaneum | 655586 | 28377 | Anolis carolinensis | ENSACAG00000004557 |
9615 | Canis familiaris | ENSCAFG00000030076 | 9358 | Choloepus hoffmanni | ENSCHOG00000013620 |
7719 | Ciona intestinalis | ENSCING00000013048 | 9483 | Callithrix jacchus | ENSCJAG00000007071 |
10141 | Cavia porcellus | ENSCPOG00000023429 | 51511 | Ciona savignyi | ENSCSAVG00000000947 |
9361 | Dasypus novemcinctus | ENSDNOG00000012261 | 10020 | Dipodomys ordii | ENSDORG00000002371 |
9365 | Erinaceus europaeus | ENSEEUG00000007978 | 9371 | Echinops telfairi | ENSETEG00000019757 |
69293 | Gasterosteus aculeatus | ENSGACG00000012015 | 9031 | Gallus gallus | ENSGALG00000000936 |
8049 | Gadus morhua | ENSGMOG00000006452 | 7897 | Latimeria chalumnae | ENSLACG00000015722 |
9785 | Loxodonta africana | ENSLAFG00000015481 | 9315 | Macropus eugenii | ENSMEUG00000012451 |
30608 | Microcebus murinus | ENSMICG00000010287 | 59463 | Myotis lucifugus | ENSMLUG00000010463 |
9544 | Macaca mulatta | ENSMMUG00000002236 | 61853 | Nomascus leucogenys | ENSNLEG00000017412 |
9258 | Ornithorhynchus anatinus | ENSOANG00000022733 | 30611 | Otolemur garnettii | ENSOGAG00000001158 |
9978 | Ochotona princeps | ENSOPRG00000015599 | 13735 | Pelodiscus sinensis | ENSPSIG00000005200 |
9598 | Pan troglodytes | ENSPTRG00000021377 | 132908 | Pteropus vampyrus | ENSPVAG00000004265 |
10116 | Rattus norvegicus | ENSRNOG00000017019 | 9305 | Sarcophilus harrisii | ENSSHAG00000014535 |
9823 | Sus scrofa | ENSSSCG00000005606 | 59729 | Taeniopygia guttata | ENSTGUG00000007409 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018553 | 31033 | Takifugu rubripes | ENSTRUG00000009042 |
9478 | Tarsius syrichta | ENSTSYG00000012930 | 9739 | Tursiops truncatus | ENSTTRG00000013199 |
30538 | Vicugna pacos | ENSVPAG00000004576 | 8364 | Xenopus tropicalis | ENSXETG00000000742 |
9103 | Meleagris gallopavo | ENSMGAG00000008601 | 9813 | Procavia capensis | ENSPCAG00000013608 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000026973 | 8083 | Xiphophorus maculatus | ENSXMAG00000000206 |