Basic Information | |||
Gene ID | ENSOGAG00000001158 | ||
Gene Name | LMX1B | ||
Full Name | Uncharacterized protein | ||
Organism | Otolemur garnettii [30611] |
Cross Reference | |||
UniProt | H0WI04 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSOGAP00000001035 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 204 | 271 | 5.00e-24 | Homeodomain-like |
ENSOGAP00000001035 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 119 | 171 | 4.30e-15 | Zinc finger, LIM-type |
ENSOGAP00000001035 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 55 | 118 | 5.10e-17 | Zinc finger, LIM-type |
ENSOGAP00000001035 | Pfam | PF00046 | IPR001356 | 220 | 276 | 1.60e-17 | Homeobox domain |
ENSOGAP00000001035 | Pfam | PF00412 | IPR001781 | 115 | 172 | 1.20e-15 | Zinc finger, LIM-type |
ENSOGAP00000001035 | Pfam | PF00412 | IPR001781 | 56 | 111 | 1.40e-16 | Zinc finger, LIM-type |
ENSOGAP00000001035 | ProSitePatterns | PS00027 | IPR017970 | 252 | 275 | - | Homeobox, conserved site |
ENSOGAP00000001035 | ProSitePatterns | PS00478 | IPR001781 | 115 | 150 | - | Zinc finger, LIM-type |
ENSOGAP00000001035 | ProSitePatterns | PS00478 | IPR001781 | 56 | 90 | - | Zinc finger, LIM-type |
ENSOGAP00000001035 | ProSiteProfiles | PS50023 | IPR001781 | 114 | 175 | 0.00e-00 | Zinc finger, LIM-type |
ENSOGAP00000001035 | ProSiteProfiles | PS50023 | IPR001781 | 54 | 113 | 0.00e-00 | Zinc finger, LIM-type |
ENSOGAP00000001035 | ProSiteProfiles | PS50071 | IPR001356 | 217 | 277 | 0.00e-00 | Homeobox domain |
ENSOGAP00000001035 | SMART | SM00132 | IPR001781 | 114 | 168 | 2.10e-19 | Zinc finger, LIM-type |
ENSOGAP00000001035 | SMART | SM00132 | IPR001781 | 55 | 106 | 1.80e-19 | Zinc finger, LIM-type |
ENSOGAP00000001035 | SMART | SM00389 | IPR001356 | 219 | 281 | 6.00e-24 | Homeobox domain |
ENSOGAP00000001035 | SUPERFAMILY | SSF46689 | IPR009057 | 208 | 277 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSOGAP00000001035 | PF00412 | 1.2e-32 | LIM | LIM domain |
ENSOGAP00000001035 | PF00046 | 7.2e-18 | Homeobox | Homeobox domain |
ENSOGAP00000001035 | PF05920 | 0.00013 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSOGAP00000001035 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSOGAP00000001035 | GO:0007275 | biological_process | multicellular organismal development |
ENSOGAP00000001035 | GO:0005634 | cellular_component | nucleus |
ENSOGAP00000001035 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSOGAP00000001035 | GO:0008270 | molecular_function | zinc ion binding |
ENSOGAP00000001035 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016205 | 7425 | Nasonia vitripennis | 100121564 |
7029 | Acyrthosiphon pisum | 100166469 | 10224 | Saccoglossus kowalevskii | 100328994 |
30195 | Bombus terrestris | 100644798 | 8128 | Oreochromis niloticus | 100696266 |
132113 | Bombus impatiens | 100744167 | 7463 | Apis florea | 100872112 |
143995 | Megachile rotundata | 100879464 | 34638 | Metaseiulus occidentalis | 100909136 |
9597 | Pan paniscus | 100984491 | 9555 | Papio anubis | 101016885 |
39432 | Saimiri boliviensis | 101047214 | 9685 | Felis catus | 101086098 |
8090 | Oryzias latipes | 101159592 | 9669 | Mustela putorius furo | 101686194 |
7955 | Danio rerio | 554360 | 7668 | Strongylocentrotus purpuratus | 585635 |
7070 | Tribolium castaneum | 655586 | 7460 | Apis mellifera | 724778 |
9913 | Bos taurus | ENSBTAG00000010228 | 9615 | Canis familiaris | ENSCAFG00000030076 |
7719 | Ciona intestinalis | ENSCING00000013048 | 9483 | Callithrix jacchus | ENSCJAG00000007071 |
10141 | Cavia porcellus | ENSCPOG00000023429 | 51511 | Ciona savignyi | ENSCSAVG00000000947 |
10020 | Dipodomys ordii | ENSDORG00000002371 | 9796 | Equus caballus | ENSECAG00000018605 |
9365 | Erinaceus europaeus | ENSEEUG00000007978 | 9371 | Echinops telfairi | ENSETEG00000019757 |
69293 | Gasterosteus aculeatus | ENSGACG00000012015 | 9031 | Gallus gallus | ENSGALG00000000936 |
8049 | Gadus morhua | ENSGMOG00000006452 | 7897 | Latimeria chalumnae | ENSLACG00000016220 |
9785 | Loxodonta africana | ENSLAFG00000015481 | 9315 | Macropus eugenii | ENSMEUG00000012451 |
9103 | Meleagris gallopavo | ENSMGAG00000008601 | 30608 | Microcebus murinus | ENSMICG00000010287 |
9544 | Macaca mulatta | ENSMMUG00000002236 | 7227 | Drosophila melanogaster | 39406 |
28377 | Anolis carolinensis | ENSACAG00000004557 | 61853 | Nomascus leucogenys | ENSNLEG00000017412 |
9598 | Pan troglodytes | ENSPTRG00000021377 | 9978 | Ochotona princeps | ENSOPRG00000015599 |
9813 | Procavia capensis | ENSPCAG00000013608 | 13735 | Pelodiscus sinensis | ENSPSIG00000005200 |
132908 | Pteropus vampyrus | ENSPVAG00000004265 | 10116 | Rattus norvegicus | ENSRNOG00000017019 |
9823 | Sus scrofa | ENSSSCG00000005606 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000026973 |
59729 | Taeniopygia guttata | ENSTGUG00000007409 | 99883 | Tetraodon nigroviridis | ENSTNIG00000018979 |
31033 | Takifugu rubripes | ENSTRUG00000009042 | 9739 | Tursiops truncatus | ENSTTRG00000013199 |
8364 | Xenopus tropicalis | ENSXETG00000000742 | 8083 | Xiphophorus maculatus | ENSXMAG00000000206 |
Paralogs | |||
ENSOGAG00000011315 |