Basic Information | |||
Gene ID | 100356586 | ||
Gene Name | LHX5 | ||
Full Name | Uncharacterized protein | ||
Organism | Oryctolagus cuniculus [9986] |
Cross Reference | |||
UniProt | G1SWZ8 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSOCUP00000008044 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 183 | 240 | 1.40e-23 | Homeodomain-like |
ENSOCUP00000008044 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 3 | 66 | 8.00e-18 | Zinc finger, LIM-type |
ENSOCUP00000008044 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 67 | 120 | 2.30e-15 | Zinc finger, LIM-type |
ENSOCUP00000008044 | Pfam | PF00046 | IPR001356 | 181 | 237 | 1.10e-19 | Homeobox domain |
ENSOCUP00000008044 | Pfam | PF00412 | IPR001781 | 5 | 60 | 2.20e-16 | Zinc finger, LIM-type |
ENSOCUP00000008044 | Pfam | PF00412 | IPR001781 | 64 | 121 | 3.00e-18 | Zinc finger, LIM-type |
ENSOCUP00000008044 | ProSitePatterns | PS00027 | IPR017970 | 213 | 236 | - | Homeobox, conserved site |
ENSOCUP00000008044 | ProSitePatterns | PS00478 | IPR001781 | 5 | 39 | - | Zinc finger, LIM-type |
ENSOCUP00000008044 | ProSitePatterns | PS00478 | IPR001781 | 64 | 99 | - | Zinc finger, LIM-type |
ENSOCUP00000008044 | ProSiteProfiles | PS50023 | IPR001781 | 3 | 62 | 0.00e-00 | Zinc finger, LIM-type |
ENSOCUP00000008044 | ProSiteProfiles | PS50023 | IPR001781 | 63 | 125 | 0.00e-00 | Zinc finger, LIM-type |
ENSOCUP00000008044 | ProSiteProfiles | PS50071 | IPR001356 | 178 | 238 | 0.00e-00 | Homeobox domain |
ENSOCUP00000008044 | SMART | SM00132 | IPR001781 | 4 | 55 | 6.80e-20 | Zinc finger, LIM-type |
ENSOCUP00000008044 | SMART | SM00132 | IPR001781 | 63 | 118 | 1.30e-21 | Zinc finger, LIM-type |
ENSOCUP00000008044 | SMART | SM00389 | IPR001356 | 180 | 242 | 5.40e-25 | Homeobox domain |
ENSOCUP00000008044 | SUPERFAMILY | SSF46689 | IPR009057 | 167 | 239 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSOCUP00000008044 | PF00412 | 3.6e-35 | LIM | LIM domain |
ENSOCUP00000008044 | PF00046 | 6.2e-20 | Homeobox | Homeobox domain |
ENSOCUP00000008044 | PF05920 | 2e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSOCUP00000008044 | GO:0005634 | cellular_component | nucleus |
ENSOCUP00000008044 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSOCUP00000008044 | GO:0008270 | molecular_function | zinc ion binding |
ENSOCUP00000008044 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100028420 | 7425 | Nasonia vitripennis | 100116733 |
7029 | Acyrthosiphon pisum | 100158984 | 10224 | Saccoglossus kowalevskii | 100303523 |
9785 | Loxodonta africana | 100657099 | 9555 | Papio anubis | 101016716 |
8090 | Oryzias latipes | 101166400 | 8364 | Xenopus tropicalis | 548836 |
7719 | Ciona intestinalis | ENSCING00000009072 | 51511 | Ciona savignyi | ENSCSAVG00000000590 |
9371 | Echinops telfairi | ENSETEG00000006405 | 30608 | Microcebus murinus | ENSMICG00000006473 |
61853 | Nomascus leucogenys | ENSNLEG00000000189 | 9813 | Procavia capensis | ENSPCAG00000010694 |
13735 | Pelodiscus sinensis | ENSPSIG00000005953 | 9483 | Callithrix jacchus | 100395248 |
400682 | Amphimedon queenslandica | 100634938 | 8128 | Oreochromis niloticus | 100706090 |
10029 | Cricetulus griseus | 100768655 | 30611 | Otolemur garnettii | 100951554 |
9597 | Pan paniscus | 100988571 | 39432 | Saimiri boliviensis | 101029480 |
9595 | Gorilla gorilla | 101135725 | 9669 | Mustela putorius furo | 101685089 |
43179 | Ictidomys tridecemlineatus | 101963559 | 7897 | Latimeria chalumnae | 102363675 |
7955 | Danio rerio | 30465 | 9606 | Homo sapiens | 64211 |
9544 | Macaca mulatta | 713417 | 28377 | Anolis carolinensis | ENSACAG00000005037 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000008592 | 10141 | Cavia porcellus | ENSCPOG00000023977 |
9361 | Dasypus novemcinctus | ENSDNOG00000010448 | 9796 | Equus caballus | ENSECAG00000016915 |
9315 | Macropus eugenii | ENSMEUG00000006658 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014248 |
7757 | Petromyzon marinus | ENSPMAG00000008904 | 9823 | Sus scrofa | ENSSSCG00000009869 |
37347 | Tupaia belangeri | ENSTBEG00000003770 | 99883 | Tetraodon nigroviridis | ENSTNIG00000013489 |
31033 | Takifugu rubripes | ENSTRUG00000018387 |
Paralogs | |||
ENSOCUG00000024664 |