Basic Information | |||
Gene ID | 100634938 | ||
Gene Name | LOC100634938 | ||
Full Name | PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedonqueenslandica]. | ||
Organism | Amphimedon queenslandica [400682] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003386648 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 210 | 275 | 5.50e-21 | Homeodomain-like |
XP_003386648 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 156 | 209 | 6.80e-16 | Zinc finger, LIM-type |
XP_003386648 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 93 | 155 | 1.90e-18 | Zinc finger, LIM-type |
XP_003386648 | Pfam | PF00046 | IPR001356 | 219 | 275 | 3.00e-19 | Homeobox domain |
XP_003386648 | Pfam | PF00412 | IPR001781 | 152 | 209 | 1.60e-18 | Zinc finger, LIM-type |
XP_003386648 | Pfam | PF00412 | IPR001781 | 93 | 148 | 1.60e-15 | Zinc finger, LIM-type |
XP_003386648 | ProSitePatterns | PS00027 | IPR017970 | 251 | 274 | - | Homeobox, conserved site |
XP_003386648 | ProSitePatterns | PS00478 | IPR001781 | 152 | 187 | - | Zinc finger, LIM-type |
XP_003386648 | ProSitePatterns | PS00478 | IPR001781 | 93 | 127 | - | Zinc finger, LIM-type |
XP_003386648 | ProSiteProfiles | PS50023 | IPR001781 | 151 | 213 | 0.00e-00 | Zinc finger, LIM-type |
XP_003386648 | ProSiteProfiles | PS50023 | IPR001781 | 91 | 150 | 0.00e-00 | Zinc finger, LIM-type |
XP_003386648 | ProSiteProfiles | PS50071 | IPR001356 | 216 | 276 | 0.00e-00 | Homeobox domain |
XP_003386648 | SMART | SM00132 | IPR001781 | 151 | 206 | 2.40e-20 | Zinc finger, LIM-type |
XP_003386648 | SMART | SM00132 | IPR001781 | 92 | 143 | 1.20e-17 | Zinc finger, LIM-type |
XP_003386648 | SMART | SM00389 | IPR001356 | 218 | 280 | 6.40e-25 | Homeobox domain |
XP_003386648 | SUPERFAMILY | SSF46689 | IPR009057 | 213 | 278 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003386648 | PF00412 | 1.8e-34 | LIM | LIM domain |
XP_003386648 | PF00046 | 1.6e-19 | Homeobox | Homeobox domain |
XP_003386648 | PF05920 | 5.5e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003386648 | GO:0005634 | cellular_component | nucleus |
XP_003386648 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003386648 | GO:0008270 | molecular_function | zinc ion binding |
XP_003386648 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016250 | 7425 | Nasonia vitripennis | 100120126 |
7029 | Acyrthosiphon pisum | 100164426 | 10224 | Saccoglossus kowalevskii | 100303523 |
9986 | Oryctolagus cuniculus | 100356586 | 9483 | Callithrix jacchus | 100414118 |
9601 | Pongo abelii | 100442936 | 30195 | Bombus terrestris | 100648335 |
9785 | Loxodonta africana | 100674904 | 8128 | Oreochromis niloticus | 100693378 |
132113 | Bombus impatiens | 100750204 | 10029 | Cricetulus griseus | 100758218 |
7463 | Apis florea | 100868114 | 9305 | Sarcophilus harrisii | 100929025 |
30611 | Otolemur garnettii | 100944641 | 9597 | Pan paniscus | 100968751 |
9555 | Papio anubis | 100999398 | 39432 | Saimiri boliviensis | 101040320 |
31033 | Takifugu rubripes | 101064401 | 9669 | Mustela putorius furo | 101675371 |
10090 | Mus musculus | 110648 | 6239 | Caenorhabditis elegans | 181012 |
10116 | Rattus norvegicus | 257634 | 7227 | Drosophila melanogaster | 35184 |
7070 | Tribolium castaneum | 662120 | 9031 | Gallus gallus | 776024 |
28377 | Anolis carolinensis | ENSACAG00000000857 | 9615 | Canis familiaris | ENSCAFG00000012750 |
9358 | Choloepus hoffmanni | ENSCHOG00000004170 | 7719 | Ciona intestinalis | ENSCING00000009072 |
10141 | Cavia porcellus | ENSCPOG00000023977 | 51511 | Ciona savignyi | ENSCSAVG00000000590 |
9361 | Dasypus novemcinctus | ENSDNOG00000010448 | 9796 | Equus caballus | ENSECAG00000021983 |
9685 | Felis catus | ENSFCAG00000005479 | 7897 | Latimeria chalumnae | ENSLACG00000016988 |
9315 | Macropus eugenii | ENSMEUG00000002639 | 30608 | Microcebus murinus | ENSMICG00000017555 |
8090 | Oryzias latipes | ENSORLG00000006699 | 13735 | Pelodiscus sinensis | ENSPSIG00000008129 |
37347 | Tupaia belangeri | ENSTBEG00000007734 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018735 | 9739 | Tursiops truncatus | ENSTTRG00000008900 |
30538 | Vicugna pacos | ENSVPAG00000004576 | 143995 | Megachile rotundata | 100880011 |
34638 | Metaseiulus occidentalis | 100903153 | 9595 | Gorilla gorilla | 101146924 |
8083 | Xiphophorus maculatus | 102236864 | 59463 | Myotis lucifugus | 102430726 |
9913 | Bos taurus | 539213 | 7955 | Danio rerio | 571943 |
7668 | Strongylocentrotus purpuratus | 575191 | 7460 | Apis mellifera | 725532 |
9598 | Pan troglodytes | 746333 | 9606 | Homo sapiens | 8022 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000008592 | 10020 | Dipodomys ordii | ENSDORG00000006956 |
9365 | Erinaceus europaeus | ENSEEUG00000013869 | 69293 | Gasterosteus aculeatus | ENSGACG00000016592 |
8049 | Gadus morhua | ENSGMOG00000015270 | 9103 | Meleagris gallopavo | ENSMGAG00000003074 |
9544 | Macaca mulatta | ENSMMUG00000012050 | 61853 | Nomascus leucogenys | ENSNLEG00000015953 |
9258 | Ornithorhynchus anatinus | ENSOANG00000000969 | 9978 | Ochotona princeps | ENSOPRG00000009780 |
9813 | Procavia capensis | ENSPCAG00000016565 | 132908 | Pteropus vampyrus | ENSPVAG00000002969 |
42254 | Sorex araneus | ENSSARG00000010593 | 9823 | Sus scrofa | ENSSSCG00000015536 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005001 | 8364 | Xenopus tropicalis | ENSXETG00000034077 |