Basic Information
Gene ID 100303523
Gene Name NULL
Full Name Lim domain homeobox 3/4 transcription factor
Organism Saccoglossus kowalevskii [10224]

Cross Reference
UniProt Q1PHQ7 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001158395 Gene3D G3DSA:1.10.10.60 IPR009057 156 220 2.10e-22 Homeodomain-like
NP_001158395 Gene3D G3DSA:2.10.110.10 IPR001781 31 96 3.80e-18 Zinc finger, LIM-type
NP_001158395 Gene3D G3DSA:2.10.110.10 IPR001781 97 151 1.80e-15 Zinc finger, LIM-type
NP_001158395 Pfam PF00046 IPR001356 169 225 2.00e-20 Homeobox domain
NP_001158395 Pfam PF00412 IPR001781 35 90 1.00e-15 Zinc finger, LIM-type
NP_001158395 Pfam PF00412 IPR001781 94 151 4.70e-17 Zinc finger, LIM-type
NP_001158395 ProSitePatterns PS00027 IPR017970 201 224 - Homeobox, conserved site
NP_001158395 ProSitePatterns PS00478 IPR001781 35 69 - Zinc finger, LIM-type
NP_001158395 ProSitePatterns PS00478 IPR001781 94 129 - Zinc finger, LIM-type
NP_001158395 ProSiteProfiles PS50023 IPR001781 33 92 0.00e-00 Zinc finger, LIM-type
NP_001158395 ProSiteProfiles PS50023 IPR001781 93 155 0.00e-00 Zinc finger, LIM-type
NP_001158395 ProSiteProfiles PS50071 IPR001356 166 226 0.00e-00 Homeobox domain
NP_001158395 SMART SM00132 IPR001781 34 85 5.00e-19 Zinc finger, LIM-type
NP_001158395 SMART SM00132 IPR001781 93 148 1.40e-19 Zinc finger, LIM-type
NP_001158395 SMART SM00389 IPR001356 168 230 4.30e-25 Homeobox domain
NP_001158395 SUPERFAMILY SSF46689 IPR009057 160 228 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001158395 PF00412 3.1e-33 LIM LIM domain
NP_001158395 PF00046 1.1e-20 Homeobox Homeobox domain
NP_001158395 PF05920 0.00063 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001158395 GO:0005634 cellular_component nucleus
NP_001158395 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001158395 GO:0008270 molecular_function zinc ion binding
NP_001158395 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100016250 9796 Equus caballus 100051084
7029 Acyrthosiphon pisum 100164426 7425 Nasonia vitripennis 100120126
9986 Oryctolagus cuniculus 100356586 9601 Pongo abelii 100442936
30195 Bombus terrestris 100648335 8128 Oreochromis niloticus 100693378
132113 Bombus impatiens 100750204 7463 Apis florea 100868114
9305 Sarcophilus harrisii 100929025 30611 Otolemur garnettii 100944641
9597 Pan paniscus 100968751 9555 Papio anubis 100999398
39432 Saimiri boliviensis 101040320 9669 Mustela putorius furo 101675371
8083 Xiphophorus maculatus 102219891 6239 Caenorhabditis elegans 181012
7070 Tribolium castaneum 662120 9031 Gallus gallus 776024
28377 Anolis carolinensis ENSACAG00000000857 9615 Canis familiaris ENSCAFG00000012750
7719 Ciona intestinalis ENSCING00000009072 51511 Ciona savignyi ENSCSAVG00000000590
9371 Echinops telfairi ENSETEG00000003513 7897 Latimeria chalumnae ENSLACG00000016988
9315 Macropus eugenii ENSMEUG00000002639 30608 Microcebus murinus ENSMICG00000017555
13735 Pelodiscus sinensis ENSPSIG00000008129 10116 Rattus norvegicus ENSRNOG00000003595
59729 Taeniopygia guttata ENSTGUG00000006385 99883 Tetraodon nigroviridis ENSTNIG00000018735
9483 Callithrix jacchus 100414118 400682 Amphimedon queenslandica 100634938
9785 Loxodonta africana 100657028 10029 Cricetulus griseus 100758218
143995 Megachile rotundata 100880011 34638 Metaseiulus occidentalis 100903153
31033 Takifugu rubripes 101073088 9595 Gorilla gorilla 101146924
8090 Oryzias latipes 101165225 59463 Myotis lucifugus 102430726
7227 Drosophila melanogaster 35184 9913 Bos taurus 539213
7955 Danio rerio 571943 7668 Strongylocentrotus purpuratus 575191
9598 Pan troglodytes 746333 9606 Homo sapiens 8022
9646 Ailuropoda melanoleuca ENSAMEG00000003556 9358 Choloepus hoffmanni ENSCHOG00000007567
10141 Cavia porcellus ENSCPOG00000023977 9361 Dasypus novemcinctus ENSDNOG00000010448
10020 Dipodomys ordii ENSDORG00000014432 9365 Erinaceus europaeus ENSEEUG00000013869
9685 Felis catus ENSFCAG00000005479 69293 Gasterosteus aculeatus ENSGACG00000016592
8049 Gadus morhua ENSGMOG00000015270 9103 Meleagris gallopavo ENSMGAG00000003074
9544 Macaca mulatta ENSMMUG00000012050 61853 Nomascus leucogenys ENSNLEG00000015953
9258 Ornithorhynchus anatinus ENSOANG00000000969 9978 Ochotona princeps ENSOPRG00000009780
9813 Procavia capensis ENSPCAG00000016565 132908 Pteropus vampyrus ENSPVAG00000002969
42254 Sorex araneus ENSSARG00000010593 9823 Sus scrofa ENSSSCG00000015536
43179 Ictidomys tridecemlineatus ENSSTOG00000005001 37347 Tupaia belangeri ENSTBEG00000007734
9739 Tursiops truncatus ENSTTRG00000008900 8364 Xenopus tropicalis ENSXETG00000034077