Basic Information
Gene ID ENSCING00000009072
Gene Name lhx3
Full Name Uncharacterized protein
Organism Ciona intestinalis [7719]

Cross Reference
UniProt F6QIP6 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCINP00000018414 Gene3D G3DSA:1.10.10.60 IPR009057 325 386 8.40e-22 Homeodomain-like
ENSCINP00000018414 Gene3D G3DSA:2.10.110.10 IPR001781 192 256 3.30e-16 Zinc finger, LIM-type
ENSCINP00000018414 Gene3D G3DSA:2.10.110.10 IPR001781 257 310 8.00e-15 Zinc finger, LIM-type
ENSCINP00000018414 Pfam PF00046 IPR001356 324 380 1.10e-19 Homeobox domain
ENSCINP00000018414 Pfam PF00412 IPR001781 195 250 1.80e-13 Zinc finger, LIM-type
ENSCINP00000018414 Pfam PF00412 IPR001781 254 311 9.50e-17 Zinc finger, LIM-type
ENSCINP00000018414 ProSitePatterns PS00027 IPR017970 356 379 - Homeobox, conserved site
ENSCINP00000018414 ProSitePatterns PS00478 IPR001781 195 229 - Zinc finger, LIM-type
ENSCINP00000018414 ProSitePatterns PS00478 IPR001781 254 289 - Zinc finger, LIM-type
ENSCINP00000018414 ProSiteProfiles PS50023 IPR001781 193 252 0.00e-00 Zinc finger, LIM-type
ENSCINP00000018414 ProSiteProfiles PS50023 IPR001781 253 315 0.00e-00 Zinc finger, LIM-type
ENSCINP00000018414 ProSiteProfiles PS50071 IPR001356 321 381 0.00e-00 Homeobox domain
ENSCINP00000018414 SMART SM00132 IPR001781 194 245 4.50e-15 Zinc finger, LIM-type
ENSCINP00000018414 SMART SM00132 IPR001781 253 308 3.70e-19 Zinc finger, LIM-type
ENSCINP00000018414 SMART SM00389 IPR001356 323 385 4.20e-24 Homeobox domain
ENSCINP00000018414 SUPERFAMILY SSF46689 IPR009057 317 383 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCINP00000018414 PF00412 1.1e-30 LIM LIM domain
ENSCINP00000018414 PF00046 5e-20 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCINP00000018414 GO:0005634 cellular_component nucleus
ENSCINP00000018414 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSCINP00000018414 GO:0008270 molecular_function zinc ion binding
ENSCINP00000018414 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100016250 7425 Nasonia vitripennis 100120126
7029 Acyrthosiphon pisum 100164426 10224 Saccoglossus kowalevskii 100303523
9986 Oryctolagus cuniculus 100356586 9483 Callithrix jacchus 100414118
9601 Pongo abelii 100442936 400682 Amphimedon queenslandica 100634938
9785 Loxodonta africana 100657028 8128 Oreochromis niloticus 100693378
10029 Cricetulus griseus 100758218 7463 Apis florea 100868114
143995 Megachile rotundata 100880011 34638 Metaseiulus occidentalis 100903153
9305 Sarcophilus harrisii 100929025 31033 Takifugu rubripes 101064401
9595 Gorilla gorilla 101146924 9669 Mustela putorius furo 101675371
8083 Xiphophorus maculatus 102236864 59463 Myotis lucifugus 102430726
6239 Caenorhabditis elegans 181012 10116 Rattus norvegicus 257634
7227 Drosophila melanogaster 35184 9913 Bos taurus 539213
7955 Danio rerio 571943 7668 Strongylocentrotus purpuratus 575191
7070 Tribolium castaneum 662120 9598 Pan troglodytes 746333
9606 Homo sapiens 8022 9646 Ailuropoda melanoleuca ENSAMEG00000003556
9358 Choloepus hoffmanni ENSCHOG00000007567 30195 Bombus terrestris 100648335
132113 Bombus impatiens 100750204 30611 Otolemur garnettii 100944641
9597 Pan paniscus 100968751 9555 Papio anubis 100999398
39432 Saimiri boliviensis 101040320 9031 Gallus gallus 776024
28377 Anolis carolinensis ENSACAG00000000857 9615 Canis familiaris ENSCAFG00000012750
51511 Ciona savignyi ENSCSAVG00000000590 9796 Equus caballus ENSECAG00000021983
9371 Echinops telfairi ENSETEG00000003513 9315 Macropus eugenii ENSMEUG00000002639
30608 Microcebus murinus ENSMICG00000017555 8090 Oryzias latipes ENSORLG00000006699
13735 Pelodiscus sinensis ENSPSIG00000008129 59729 Taeniopygia guttata ENSTGUG00000006385
99883 Tetraodon nigroviridis ENSTNIG00000018735 10141 Cavia porcellus ENSCPOG00000023977
9361 Dasypus novemcinctus ENSDNOG00000010448 10020 Dipodomys ordii ENSDORG00000014432
9365 Erinaceus europaeus ENSEEUG00000013869 9685 Felis catus ENSFCAG00000005479
69293 Gasterosteus aculeatus ENSGACG00000016592 8049 Gadus morhua ENSGMOG00000015270
7897 Latimeria chalumnae ENSLACG00000016988 9103 Meleagris gallopavo ENSMGAG00000003074
9544 Macaca mulatta ENSMMUG00000012050 61853 Nomascus leucogenys ENSNLEG00000015953
9258 Ornithorhynchus anatinus ENSOANG00000000969 9978 Ochotona princeps ENSOPRG00000009780
9813 Procavia capensis ENSPCAG00000016565 132908 Pteropus vampyrus ENSPVAG00000002969
42254 Sorex araneus ENSSARG00000010593 9823 Sus scrofa ENSSSCG00000015536
43179 Ictidomys tridecemlineatus ENSSTOG00000005001 37347 Tupaia belangeri ENSTBEG00000007734
9739 Tursiops truncatus ENSTTRG00000008900 8364 Xenopus tropicalis ENSXETG00000034077