Basic Information
Gene ID 101162114
Gene Name sox2
Full Name SRY-box containing gene 2
Organism Oryzias latipes [8090]

Cross Reference
UniProt C3VV07 UniGene Ola.27549
PDB NULL OMIM NULL
KEGG ola:101162114 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8090.ENSORLP00000014647

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000014647 Gene3D G3DSA:1.10.30.10 IPR009071 38 118 7.80e-41 High mobility group box domain
ENSORLP00000014647 Pfam PF00505 IPR009071 40 108 5.50e-27 High mobility group box domain
ENSORLP00000014647 Pfam PF12336 IPR022097 109 201 1.40e-22 Transcription factor SOX
ENSORLP00000014647 ProSiteProfiles PS50118 IPR009071 40 108 0.00e-00 High mobility group box domain
ENSORLP00000014647 SMART SM00398 IPR009071 39 109 5.50e-31 High mobility group box domain
ENSORLP00000014647 SUPERFAMILY SSF47095 IPR009071 27 112 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000014647 PF00505 3.1e-27 HMG_box HMG (high mobility group) box
ENSORLP00000014647 PF12336 1.4e-22 SOXp SOX transcription factor
ENSORLP00000014647 PF09011 1.4e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000014647 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000014647 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000014647 GO:0007275 biological_process multicellular organismal development
ENSORLP00000014647 GO:0005634 cellular_component nucleus
ENSORLP00000014647 GO:0003677 molecular_function DNA binding
ENSORLP00000014647 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
6087 Hydra magnipapillata 100205840 9601 Pongo abelii 100460719
30195 Bombus terrestris 100643013 8128 Oreochromis niloticus 100695175
132113 Bombus impatiens 100742000 10029 Cricetulus griseus 100759815
34638 Metaseiulus occidentalis 100898556 30611 Otolemur garnettii 100963354
9555 Papio anubis 101022620 39432 Saimiri boliviensis 101037370
31033 Takifugu rubripes 101073272 7029 Acyrthosiphon pisum 100164548
7425 Nasonia vitripennis 100678051 7463 Apis florea 100866912
7897 Latimeria chalumnae 102366157 7227 Drosophila melanogaster 39567
7719 Ciona intestinalis ENSCING00000006005 9595 Gorilla gorilla ENSGGOG00000027572
9978 Ochotona princeps ENSOPRG00000017106 42254 Sorex araneus ENSSARG00000006102
43179 Ictidomys tridecemlineatus ENSSTOG00000011011 8083 Xiphophorus maculatus 102226408
13735 Pelodiscus sinensis 102443720 7668 Strongylocentrotus purpuratus 373202
9031 Gallus gallus 396105 8364 Xenopus tropicalis 407873
9598 Pan troglodytes 460869 9615 Canis familiaris 488092
10116 Rattus norvegicus 499593 9606 Homo sapiens 6657
9646 Ailuropoda melanoleuca ENSAMEG00000011029 9483 Callithrix jacchus ENSCJAG00000008401
9361 Dasypus novemcinctus ENSDNOG00000019903 10020 Dipodomys ordii ENSDORG00000007481
9796 Equus caballus ENSECAG00000010653 9365 Erinaceus europaeus ENSEEUG00000013305
9371 Echinops telfairi ENSETEG00000006366 9685 Felis catus ENSFCAG00000029205
69293 Gasterosteus aculeatus ENSGACG00000006100 8049 Gadus morhua ENSGMOG00000019777
59463 Myotis lucifugus ENSMLUG00000013015 13616 Monodelphis domestica ENSMODG00000021292
9258 Ornithorhynchus anatinus ENSOANG00000004458 9986 Oryctolagus cuniculus ENSOCUG00000011135
9813 Procavia capensis ENSPCAG00000003690 9823 Sus scrofa ENSSSCG00000011771
99883 Tetraodon nigroviridis ENSTNIG00000003970 9478 Tarsius syrichta ENSTSYG00000001164
9739 Tursiops truncatus ENSTTRG00000004853 30538 Vicugna pacos ENSVPAG00000010334

Paralogs
100304454 ENSORLG00000017755