Basic Information
Gene ID 100973412
Gene Name RFC1
Full Name PREDICTED: replication factor C subunit 1 [Pan paniscus].
Organism Pan paniscus [9597]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_003832228 Gene3D G3DSA:3.40.50.10190 IPR001357 402 481 2.60e-24 BRCT domain
XP_003832228 Pfam PF00004 IPR003959 648 774 3.80e-14 ATPase, AAA-type, core
XP_003832228 Pfam PF00533 IPR001357 404 479 5.70e-16 BRCT domain
XP_003832228 Pfam PF08519 IPR013725 915 1068 3.10e-60 DNA replication factor RFC1, C-terminal
XP_003832228 PIRSF PIRSF036578 IPR012178 1 1148 0.00e-00 DNA replication factor C, large subunit
XP_003832228 ProSiteProfiles PS50172 IPR001357 402 480 0.00e-00 BRCT domain
XP_003832228 SMART SM00292 IPR001357 404 482 9.80e-18 BRCT domain
XP_003832228 SMART SM00382 IPR003593 643 778 8.30e-12 AAA+ ATPase domain
XP_003832228 SUPERFAMILY SSF48019 IPR008921 846 985 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
XP_003832228 SUPERFAMILY SSF52113 IPR001357 403 480 0.00e-00 BRCT domain
XP_003832228 SUPERFAMILY SSF52540 IPR027417 584 834 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_003832228 PF08519 0 RFC1 Replication factor RFC1 C terminal domain
XP_003832228 PF00533 2e-16 BRCT BRCA1 C Terminus (BRCT) domain
XP_003832228 PF00004 1.4e-14 AAA ATPase family associated with various cellular activities (AAA)
XP_003832228 PF13207 4.5e-07 AAA_17 AAA domain
XP_003832228 PF12738 1.5e-05 PTCB-BRCT twin BRCT domain
XP_003832228 PF13401 0.00013 AAA_22 AAA domain
XP_003832228 PF05496 0.00032 RuvB_N Holliday junction DNA helicase ruvB N-terminus
XP_003832228 PF13173 0.00083 AAA_14 AAA domain
XP_003832228 PF07728 0.00088 AAA_5 AAA domain (dynein-related subfamily)

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
400682 Amphimedon queenslandica 100634225 132113 Bombus impatiens 100741454
34638 Metaseiulus occidentalis 100907287 7425 Nasonia vitripennis 100119045
7029 Acyrthosiphon pisum 100160866 6087 Hydra magnipapillata 100214385
30195 Bombus terrestris 100648012 9555 Papio anubis 101002449
39432 Saimiri boliviensis 101035144 10090 Mus musculus 19687
7227 Drosophila melanogaster 40607 9544 Macaca mulatta 698987
9646 Ailuropoda melanoleuca ENSAMEG00000003216 9913 Bos taurus ENSBTAG00000014515
9358 Choloepus hoffmanni ENSCHOG00000012289 9483 Callithrix jacchus ENSCJAG00000033486
51511 Ciona savignyi ENSCSAVG00000000485 9365 Erinaceus europaeus ENSEEUG00000006198
9371 Echinops telfairi ENSETEG00000003990 9685 Felis catus ENSFCAG00000001781
9031 Gallus gallus ENSGALG00000014298 8049 Gadus morhua ENSGMOG00000000960
9315 Macropus eugenii ENSMEUG00000003192 9103 Meleagris gallopavo ENSMGAG00000012310
30608 Microcebus murinus ENSMICG00000016765 59463 Myotis lucifugus ENSMLUG00000013981
13616 Monodelphis domestica ENSMODG00000020548 61853 Nomascus leucogenys ENSNLEG00000017090
9986 Oryctolagus cuniculus ENSOCUG00000004739 8128 Oreochromis niloticus ENSONIG00000008987
8090 Oryzias latipes ENSORLG00000005576 9813 Procavia capensis ENSPCAG00000012348
7757 Petromyzon marinus ENSPMAG00000007814 9598 Pan troglodytes ENSPTRG00000015991
10116 Rattus norvegicus ENSRNOG00000002855 43179 Ictidomys tridecemlineatus ENSSTOG00000007088
99883 Tetraodon nigroviridis ENSTNIG00000005606 31033 Takifugu rubripes ENSTRUG00000008937
9478 Tarsius syrichta ENSTSYG00000013946 9595 Gorilla gorilla 101133967
9669 Mustela putorius furo 101684848 9615 Canis familiaris 479112
7668 Strongylocentrotus purpuratus 593379 7070 Tribolium castaneum 656183
28377 Anolis carolinensis ENSACAG00000007579 7719 Ciona intestinalis ENSCING00000005344
10141 Cavia porcellus ENSCPOG00000004248 9361 Dasypus novemcinctus ENSDNOG00000004694
10020 Dipodomys ordii ENSDORG00000010527 9796 Equus caballus ENSECAG00000024126
69293 Gasterosteus aculeatus ENSGACG00000016149 7897 Latimeria chalumnae ENSLACG00000003000
9785 Loxodonta africana ENSLAFG00000011467 9258 Ornithorhynchus anatinus ENSOANG00000010330
30611 Otolemur garnettii ENSOGAG00000012292 9978 Ochotona princeps ENSOPRG00000009989
9601 Pongo abelii ENSPPYG00000014673 13735 Pelodiscus sinensis ENSPSIG00000008430
132908 Pteropus vampyrus ENSPVAG00000002121 42254 Sorex araneus ENSSARG00000012034
9305 Sarcophilus harrisii ENSSHAG00000005764 9823 Sus scrofa ENSSSCG00000008788
37347 Tupaia belangeri ENSTBEG00000003087 59729 Taeniopygia guttata ENSTGUG00000008901
9739 Tursiops truncatus ENSTTRG00000014283 30538 Vicugna pacos ENSVPAG00000002020
8364 Xenopus tropicalis ENSXETG00000012866 8083 Xiphophorus maculatus ENSXMAG00000009566