Basic Information
Gene ID ENSMGAG00000012310
Gene Name RFC1
Full Name Uncharacterized protein
Organism Meleagris gallopavo [9103]

Cross Reference
UniProt G1NI98 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMGAP00000012976 Gene3D G3DSA:3.40.50.10190 IPR001357 398 477 1.40e-25 BRCT domain
ENSMGAP00000012976 Pfam PF00004 IPR003959 643 768 9.50e-15 ATPase, AAA-type, core
ENSMGAP00000012976 Pfam PF00533 IPR001357 400 475 2.00e-16 BRCT domain
ENSMGAP00000012976 Pfam PF08519 IPR013725 909 1064 1.40e-57 DNA replication factor RFC1, C-terminal
ENSMGAP00000012976 PIRSF PIRSF036578 IPR012178 1 1145 0.00e-00 DNA replication factor C, large subunit
ENSMGAP00000012976 ProSiteProfiles PS50172 IPR001357 398 476 0.00e-00 BRCT domain
ENSMGAP00000012976 SMART SM00292 IPR001357 400 478 8.00e-21 BRCT domain
ENSMGAP00000012976 SMART SM00382 IPR003593 638 772 6.40e-13 AAA+ ATPase domain
ENSMGAP00000012976 SUPERFAMILY SSF48019 IPR008921 840 979 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
ENSMGAP00000012976 SUPERFAMILY SSF52113 IPR001357 399 476 0.00e-00 BRCT domain
ENSMGAP00000012976 SUPERFAMILY SSF52540 IPR027417 581 830 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMGAP00000012976 PF08519 0 RFC1 Replication factor RFC1 C terminal domain
ENSMGAP00000012976 PF00533 5.4e-17 BRCT BRCA1 C Terminus (BRCT) domain
ENSMGAP00000012976 PF00004 4.1e-15 AAA ATPase family associated with various cellular activities (AAA)
ENSMGAP00000012976 PF13207 2.5e-07 AAA_17 AAA domain
ENSMGAP00000012976 PF12738 3.1e-06 PTCB-BRCT twin BRCT domain
ENSMGAP00000012976 PF13173 9.9e-05 AAA_14 AAA domain
ENSMGAP00000012976 PF13401 0.00051 AAA_22 AAA domain
ENSMGAP00000012976 PF13238 0.00056 AAA_18 AAA domain
ENSMGAP00000012976 PF00910 0.00067 RNA_helicase RNA helicase
ENSMGAP00000012976 PF05496 0.00087 RuvB_N Holliday junction DNA helicase ruvB N-terminus

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100160866 6087 Hydra magnipapillata 100214385
400682 Amphimedon queenslandica 100634225 30195 Bombus terrestris 100648012
132113 Bombus impatiens 100741454 34638 Metaseiulus occidentalis 100907287
9597 Pan paniscus 100973412 9555 Papio anubis 101002449
39432 Saimiri boliviensis 101035144 9595 Gorilla gorilla 101133967
9669 Mustela putorius furo 101684848 10090 Mus musculus 19687
7227 Drosophila melanogaster 40607 9615 Canis familiaris 479112
7668 Strongylocentrotus purpuratus 593379 7070 Tribolium castaneum 656183
28377 Anolis carolinensis ENSACAG00000007579 9646 Ailuropoda melanoleuca ENSAMEG00000003216
9913 Bos taurus ENSBTAG00000014515 9358 Choloepus hoffmanni ENSCHOG00000012289
7719 Ciona intestinalis ENSCING00000005344 9483 Callithrix jacchus ENSCJAG00000033486
10141 Cavia porcellus ENSCPOG00000004248 51511 Ciona savignyi ENSCSAVG00000000485
9361 Dasypus novemcinctus ENSDNOG00000004694 10020 Dipodomys ordii ENSDORG00000010527
9796 Equus caballus ENSECAG00000024126 9365 Erinaceus europaeus ENSEEUG00000006198
9371 Echinops telfairi ENSETEG00000003990 9685 Felis catus ENSFCAG00000001781
69293 Gasterosteus aculeatus ENSGACG00000016149 9031 Gallus gallus ENSGALG00000014298
7897 Latimeria chalumnae ENSLACG00000003000 9785 Loxodonta africana ENSLAFG00000011467
9315 Macropus eugenii ENSMEUG00000003192 9544 Macaca mulatta 698987
8049 Gadus morhua ENSGMOG00000000960 61853 Nomascus leucogenys ENSNLEG00000017090
7757 Petromyzon marinus ENSPMAG00000007814 43179 Ictidomys tridecemlineatus ENSSTOG00000007088
30608 Microcebus murinus ENSMICG00000016765 59463 Myotis lucifugus ENSMLUG00000013981
13616 Monodelphis domestica ENSMODG00000020548 9258 Ornithorhynchus anatinus ENSOANG00000010330
9986 Oryctolagus cuniculus ENSOCUG00000004739 30611 Otolemur garnettii ENSOGAG00000012292
8128 Oreochromis niloticus ENSONIG00000008987 9978 Ochotona princeps ENSOPRG00000009989
8090 Oryzias latipes ENSORLG00000005576 9813 Procavia capensis ENSPCAG00000012348
9601 Pongo abelii ENSPPYG00000014673 13735 Pelodiscus sinensis ENSPSIG00000008430
9598 Pan troglodytes ENSPTRG00000015991 132908 Pteropus vampyrus ENSPVAG00000002121
10116 Rattus norvegicus ENSRNOG00000002855 42254 Sorex araneus ENSSARG00000012034
9305 Sarcophilus harrisii ENSSHAG00000005764 9823 Sus scrofa ENSSSCG00000008788
37347 Tupaia belangeri ENSTBEG00000003087 59729 Taeniopygia guttata ENSTGUG00000008901
99883 Tetraodon nigroviridis ENSTNIG00000005606 31033 Takifugu rubripes ENSTRUG00000008937
9478 Tarsius syrichta ENSTSYG00000013946 9739 Tursiops truncatus ENSTTRG00000014283
30538 Vicugna pacos ENSVPAG00000002020 8364 Xenopus tropicalis ENSXETG00000012866
8083 Xiphophorus maculatus ENSXMAG00000009566