Basic Information
Gene ID ENSXETG00000012866
Gene Name rfc1
Full Name Uncharacterized protein
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt F7C9M5 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000028160 Gene3D G3DSA:3.40.50.10190 IPR001357 396 474 1.40e-23 BRCT domain
ENSXETP00000028160 Pfam PF00004 IPR003959 639 765 2.50e-14 ATPase, AAA-type, core
ENSXETP00000028160 Pfam PF00533 IPR001357 398 472 3.00e-14 BRCT domain
ENSXETP00000028160 Pfam PF08519 IPR013725 905 1060 1.90e-55 DNA replication factor RFC1, C-terminal
ENSXETP00000028160 PIRSF PIRSF036578 IPR012178 1 1145 0.00e-00 DNA replication factor C, large subunit
ENSXETP00000028160 ProSiteProfiles PS50172 IPR001357 395 473 0.00e-00 BRCT domain
ENSXETP00000028160 SMART SM00292 IPR001357 397 475 2.40e-17 BRCT domain
ENSXETP00000028160 SMART SM00382 IPR003593 634 768 9.80e-12 AAA+ ATPase domain
ENSXETP00000028160 SUPERFAMILY SSF48019 IPR008921 836 975 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
ENSXETP00000028160 SUPERFAMILY SSF52113 IPR001357 398 473 0.00e-00 BRCT domain
ENSXETP00000028160 SUPERFAMILY SSF52540 IPR027417 574 825 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000028160 PF08519 0 RFC1 Replication factor RFC1 C terminal domain
ENSXETP00000028160 PF00533 8.2e-15 BRCT BRCA1 C Terminus (BRCT) domain
ENSXETP00000028160 PF00004 1.1e-14 AAA ATPase family associated with various cellular activities (AAA)
ENSXETP00000028160 PF13207 4.6e-07 AAA_17 AAA domain
ENSXETP00000028160 PF13401 6.1e-05 AAA_22 AAA domain
ENSXETP00000028160 PF12738 0.00017 PTCB-BRCT twin BRCT domain

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
132113 Bombus impatiens 100741454 34638 Metaseiulus occidentalis 100907287
9595 Gorilla gorilla 101133967 9669 Mustela putorius furo 101684848
9615 Canis familiaris 479112 7668 Strongylocentrotus purpuratus 593379
7070 Tribolium castaneum 656183 28377 Anolis carolinensis ENSACAG00000007579
7719 Ciona intestinalis ENSCING00000005344 10141 Cavia porcellus ENSCPOG00000004248
9361 Dasypus novemcinctus ENSDNOG00000004694 10020 Dipodomys ordii ENSDORG00000010527
9796 Equus caballus ENSECAG00000024126 69293 Gasterosteus aculeatus ENSGACG00000016149
7897 Latimeria chalumnae ENSLACG00000003000 9785 Loxodonta africana ENSLAFG00000011467
9258 Ornithorhynchus anatinus ENSOANG00000010330 30611 Otolemur garnettii ENSOGAG00000012292
9978 Ochotona princeps ENSOPRG00000009989 9601 Pongo abelii ENSPPYG00000014673
13735 Pelodiscus sinensis ENSPSIG00000008430 132908 Pteropus vampyrus ENSPVAG00000002121
42254 Sorex araneus ENSSARG00000012034 9305 Sarcophilus harrisii ENSSHAG00000005764
9823 Sus scrofa ENSSSCG00000008788 37347 Tupaia belangeri ENSTBEG00000003087
59729 Taeniopygia guttata ENSTGUG00000008901 9739 Tursiops truncatus ENSTTRG00000014283
30538 Vicugna pacos ENSVPAG00000002020 7425 Nasonia vitripennis 100119045
7029 Acyrthosiphon pisum 100160866 30195 Bombus terrestris 100648012
9597 Pan paniscus 100973412 9555 Papio anubis 101002449
39432 Saimiri boliviensis 101035144 10090 Mus musculus 19687
7227 Drosophila melanogaster 40607 9544 Macaca mulatta 698987
9646 Ailuropoda melanoleuca ENSAMEG00000003216 9913 Bos taurus ENSBTAG00000014515
9358 Choloepus hoffmanni ENSCHOG00000012289 9483 Callithrix jacchus ENSCJAG00000033486
51511 Ciona savignyi ENSCSAVG00000000485 9365 Erinaceus europaeus ENSEEUG00000006198
9371 Echinops telfairi ENSETEG00000003990 9685 Felis catus ENSFCAG00000001781
9031 Gallus gallus ENSGALG00000014298 8049 Gadus morhua ENSGMOG00000000960
9315 Macropus eugenii ENSMEUG00000003192 9103 Meleagris gallopavo ENSMGAG00000012310
30608 Microcebus murinus ENSMICG00000016765 59463 Myotis lucifugus ENSMLUG00000013981
13616 Monodelphis domestica ENSMODG00000020548 61853 Nomascus leucogenys ENSNLEG00000017090
9986 Oryctolagus cuniculus ENSOCUG00000004739 8128 Oreochromis niloticus ENSONIG00000008987
8090 Oryzias latipes ENSORLG00000005576 9813 Procavia capensis ENSPCAG00000012348
7757 Petromyzon marinus ENSPMAG00000007814 9598 Pan troglodytes ENSPTRG00000015991
10116 Rattus norvegicus ENSRNOG00000002855 43179 Ictidomys tridecemlineatus ENSSTOG00000007088
99883 Tetraodon nigroviridis ENSTNIG00000005606 31033 Takifugu rubripes ENSTRUG00000008937
9478 Tarsius syrichta ENSTSYG00000013946 8083 Xiphophorus maculatus ENSXMAG00000009566