Basic Information
Gene ID ENSTNIG00000005606
Gene Name RFC1
Full Name Uncharacterized protein
Organism Tetraodon nigroviridis [99883]

Cross Reference
UniProt H3CJ79 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSTNIP00000008308 Gene3D G3DSA:3.40.50.10190 IPR001357 400 480 1.10e-24 BRCT domain
ENSTNIP00000008308 Pfam PF00004 IPR003959 635 761 2.30e-15 ATPase, AAA-type, core
ENSTNIP00000008308 Pfam PF00533 IPR001357 402 477 3.20e-15 BRCT domain
ENSTNIP00000008308 Pfam PF08519 IPR013725 901 1054 1.00e-56 DNA replication factor RFC1, C-terminal
ENSTNIP00000008308 PIRSF PIRSF036578 IPR012178 1 1131 0.00e-00 DNA replication factor C, large subunit
ENSTNIP00000008308 ProSiteProfiles PS50172 IPR001357 400 480 0.00e-00 BRCT domain
ENSTNIP00000008308 SMART SM00292 IPR001357 402 480 6.60e-20 BRCT domain
ENSTNIP00000008308 SMART SM00382 IPR003593 630 764 1.40e-11 AAA+ ATPase domain
ENSTNIP00000008308 SUPERFAMILY SSF48019 IPR008921 832 971 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
ENSTNIP00000008308 SUPERFAMILY SSF52113 IPR001357 401 479 0.00e-00 BRCT domain
ENSTNIP00000008308 SUPERFAMILY SSF52540 IPR027417 570 817 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSTNIP00000008308 PF08519 0 RFC1 Replication factor RFC1 C terminal domain
ENSTNIP00000008308 PF00004 1e-15 AAA ATPase family associated with various cellular activities (AAA)
ENSTNIP00000008308 PF00533 1.4e-15 BRCT BRCA1 C Terminus (BRCT) domain
ENSTNIP00000008308 PF13207 7.1e-08 AAA_17 AAA domain
ENSTNIP00000008308 PF12738 2.9e-06 PTCB-BRCT twin BRCT domain
ENSTNIP00000008308 PF13401 1.2e-05 AAA_22 AAA domain
ENSTNIP00000008308 PF07728 0.00036 AAA_5 AAA domain (dynein-related subfamily)
ENSTNIP00000008308 PF05496 0.0009 RuvB_N Holliday junction DNA helicase ruvB N-terminus

Gene Ontology Annotation
Protein Entry Name Space Description
ENSTNIP00000008308 GO:0005634 cellular_component nucleus
ENSTNIP00000008308 GO:0005524 molecular_function ATP binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100119045 7029 Acyrthosiphon pisum 100160866
6087 Hydra magnipapillata 100214385 400682 Amphimedon queenslandica 100634225
30195 Bombus terrestris 100648012 132113 Bombus impatiens 100741454
34638 Metaseiulus occidentalis 100907287 9597 Pan paniscus 100973412
9555 Papio anubis 101002449 39432 Saimiri boliviensis 101035144
9595 Gorilla gorilla 101133967 9669 Mustela putorius furo 101684848
10090 Mus musculus 19687 7227 Drosophila melanogaster 40607
9615 Canis familiaris 479112 7668 Strongylocentrotus purpuratus 593379
7070 Tribolium castaneum 656183 28377 Anolis carolinensis ENSACAG00000007579
9646 Ailuropoda melanoleuca ENSAMEG00000003216 9913 Bos taurus ENSBTAG00000014515
9358 Choloepus hoffmanni ENSCHOG00000012289 7719 Ciona intestinalis ENSCING00000005344
9483 Callithrix jacchus ENSCJAG00000033486 10141 Cavia porcellus ENSCPOG00000004248
51511 Ciona savignyi ENSCSAVG00000000485 9361 Dasypus novemcinctus ENSDNOG00000004694
10020 Dipodomys ordii ENSDORG00000010527 9796 Equus caballus ENSECAG00000024126
9365 Erinaceus europaeus ENSEEUG00000006198 9371 Echinops telfairi ENSETEG00000003990
9685 Felis catus ENSFCAG00000001781 69293 Gasterosteus aculeatus ENSGACG00000016149
9031 Gallus gallus ENSGALG00000014298 7897 Latimeria chalumnae ENSLACG00000003000
9785 Loxodonta africana ENSLAFG00000011467 9315 Macropus eugenii ENSMEUG00000003192
30608 Microcebus murinus ENSMICG00000016765 59463 Myotis lucifugus ENSMLUG00000013981
13616 Monodelphis domestica ENSMODG00000020548 9258 Ornithorhynchus anatinus ENSOANG00000010330
9986 Oryctolagus cuniculus ENSOCUG00000004739 30611 Otolemur garnettii ENSOGAG00000012292
9978 Ochotona princeps ENSOPRG00000009989 8090 Oryzias latipes ENSORLG00000005576
9813 Procavia capensis ENSPCAG00000012348 9601 Pongo abelii ENSPPYG00000014673
13735 Pelodiscus sinensis ENSPSIG00000008430 9598 Pan troglodytes ENSPTRG00000015991
132908 Pteropus vampyrus ENSPVAG00000002121 10116 Rattus norvegicus ENSRNOG00000002855
42254 Sorex araneus ENSSARG00000012034 9305 Sarcophilus harrisii ENSSHAG00000005764
9823 Sus scrofa ENSSSCG00000008788 37347 Tupaia belangeri ENSTBEG00000003087
59729 Taeniopygia guttata ENSTGUG00000008901 9544 Macaca mulatta 698987
8049 Gadus morhua ENSGMOG00000000960 9103 Meleagris gallopavo ENSMGAG00000012310
61853 Nomascus leucogenys ENSNLEG00000017090 8128 Oreochromis niloticus ENSONIG00000008987
7757 Petromyzon marinus ENSPMAG00000007814 43179 Ictidomys tridecemlineatus ENSSTOG00000007088
31033 Takifugu rubripes ENSTRUG00000008937 9478 Tarsius syrichta ENSTSYG00000013946
9739 Tursiops truncatus ENSTTRG00000014283 30538 Vicugna pacos ENSVPAG00000002020
8364 Xenopus tropicalis ENSXETG00000012866 8083 Xiphophorus maculatus ENSXMAG00000009566