Basic Information | |||
Gene ID | 101035144 | ||
Gene Name | RFC1 | ||
Full Name | PREDICTED: replication factor C subunit 1 [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003927570 | Gene3D | G3DSA:3.40.50.10190 | IPR001357 | 402 | 481 | 4.90e-25 | BRCT domain |
XP_003927570 | Pfam | PF00004 | IPR003959 | 647 | 774 | 3.20e-14 | ATPase, AAA-type, core |
XP_003927570 | Pfam | PF00533 | IPR001357 | 404 | 479 | 3.60e-16 | BRCT domain |
XP_003927570 | Pfam | PF08519 | IPR013725 | 915 | 1068 | 8.10e-60 | DNA replication factor RFC1, C-terminal |
XP_003927570 | PIRSF | PIRSF036578 | IPR012178 | 1 | 1148 | 0.00e-00 | DNA replication factor C, large subunit |
XP_003927570 | ProSiteProfiles | PS50172 | IPR001357 | 402 | 480 | 0.00e-00 | BRCT domain |
XP_003927570 | SMART | SM00292 | IPR001357 | 404 | 482 | 3.60e-18 | BRCT domain |
XP_003927570 | SMART | SM00382 | IPR003593 | 643 | 778 | 8.50e-13 | AAA+ ATPase domain |
XP_003927570 | SUPERFAMILY | SSF48019 | IPR008921 | 846 | 985 | 0.00e-00 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
XP_003927570 | SUPERFAMILY | SSF52113 | IPR001357 | 403 | 480 | 0.00e-00 | BRCT domain |
XP_003927570 | SUPERFAMILY | SSF52540 | IPR027417 | 584 | 834 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003927570 | PF08519 | 0 | RFC1 | Replication factor RFC1 C terminal domain |
XP_003927570 | PF00533 | 1.3e-16 | BRCT | BRCA1 C Terminus (BRCT) domain |
XP_003927570 | PF00004 | 1.3e-14 | AAA | ATPase family associated with various cellular activities (AAA) |
XP_003927570 | PF13207 | 1.3e-07 | AAA_17 | AAA domain |
XP_003927570 | PF12738 | 1.8e-05 | PTCB-BRCT | twin BRCT domain |
XP_003927570 | PF05496 | 4.7e-05 | RuvB_N | Holliday junction DNA helicase ruvB N-terminus |
XP_003927570 | PF06414 | 0.00017 | Zeta_toxin | Zeta toxin |
XP_003927570 | PF13401 | 0.00019 | AAA_22 | AAA domain |
XP_003927570 | PF13173 | 0.0002 | AAA_14 | AAA domain |
XP_003927570 | PF07728 | 0.00023 | AAA_5 | AAA domain (dynein-related subfamily) |
XP_003927570 | PF13671 | 0.0009 | AAA_33 | AAA domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003927570 | GO:0005634 | cellular_component | nucleus |
XP_003927570 | GO:0005524 | molecular_function | ATP binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100119045 | 7029 | Acyrthosiphon pisum | 100160866 |
6087 | Hydra magnipapillata | 100214385 | 400682 | Amphimedon queenslandica | 100634225 |
30195 | Bombus terrestris | 100648012 | 132113 | Bombus impatiens | 100741454 |
34638 | Metaseiulus occidentalis | 100907287 | 9597 | Pan paniscus | 100973412 |
9555 | Papio anubis | 101002449 | 9544 | Macaca mulatta | 698987 |
8049 | Gadus morhua | ENSGMOG00000000960 | 9103 | Meleagris gallopavo | ENSMGAG00000012310 |
61853 | Nomascus leucogenys | ENSNLEG00000017090 | 8128 | Oreochromis niloticus | ENSONIG00000008987 |
7757 | Petromyzon marinus | ENSPMAG00000007814 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000007088 |
99883 | Tetraodon nigroviridis | ENSTNIG00000005606 | 9595 | Gorilla gorilla | 101133967 |
9669 | Mustela putorius furo | 101684848 | 10090 | Mus musculus | 19687 |
7227 | Drosophila melanogaster | 40607 | 9615 | Canis familiaris | 479112 |
7668 | Strongylocentrotus purpuratus | 593379 | 7070 | Tribolium castaneum | 656183 |
28377 | Anolis carolinensis | ENSACAG00000007579 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000003216 |
9913 | Bos taurus | ENSBTAG00000014515 | 9358 | Choloepus hoffmanni | ENSCHOG00000012289 |
7719 | Ciona intestinalis | ENSCING00000005344 | 9483 | Callithrix jacchus | ENSCJAG00000033486 |
10141 | Cavia porcellus | ENSCPOG00000004248 | 51511 | Ciona savignyi | ENSCSAVG00000000485 |
9361 | Dasypus novemcinctus | ENSDNOG00000004694 | 10020 | Dipodomys ordii | ENSDORG00000010527 |
9796 | Equus caballus | ENSECAG00000024126 | 9365 | Erinaceus europaeus | ENSEEUG00000006198 |
9371 | Echinops telfairi | ENSETEG00000003990 | 9685 | Felis catus | ENSFCAG00000001781 |
69293 | Gasterosteus aculeatus | ENSGACG00000016149 | 9031 | Gallus gallus | ENSGALG00000014298 |
7897 | Latimeria chalumnae | ENSLACG00000003000 | 9785 | Loxodonta africana | ENSLAFG00000011467 |
9315 | Macropus eugenii | ENSMEUG00000003192 | 30608 | Microcebus murinus | ENSMICG00000016765 |
59463 | Myotis lucifugus | ENSMLUG00000013981 | 13616 | Monodelphis domestica | ENSMODG00000020548 |
9258 | Ornithorhynchus anatinus | ENSOANG00000010330 | 9986 | Oryctolagus cuniculus | ENSOCUG00000004739 |
30611 | Otolemur garnettii | ENSOGAG00000012292 | 9978 | Ochotona princeps | ENSOPRG00000009989 |
8090 | Oryzias latipes | ENSORLG00000005576 | 9813 | Procavia capensis | ENSPCAG00000012348 |
9601 | Pongo abelii | ENSPPYG00000014673 | 13735 | Pelodiscus sinensis | ENSPSIG00000008430 |
9598 | Pan troglodytes | ENSPTRG00000015991 | 132908 | Pteropus vampyrus | ENSPVAG00000002121 |
10116 | Rattus norvegicus | ENSRNOG00000002855 | 42254 | Sorex araneus | ENSSARG00000012034 |
9305 | Sarcophilus harrisii | ENSSHAG00000005764 | 9823 | Sus scrofa | ENSSSCG00000008788 |
37347 | Tupaia belangeri | ENSTBEG00000003087 | 59729 | Taeniopygia guttata | ENSTGUG00000008901 |
31033 | Takifugu rubripes | ENSTRUG00000008937 | 9478 | Tarsius syrichta | ENSTSYG00000013946 |
9739 | Tursiops truncatus | ENSTTRG00000014283 | 30538 | Vicugna pacos | ENSVPAG00000002020 |
8364 | Xenopus tropicalis | ENSXETG00000012866 | 8083 | Xiphophorus maculatus | ENSXMAG00000009566 |