Basic Information
Gene ID ENSSSCG00000008788
Gene Name RFC1
Full Name Uncharacterized protein
Organism Sus scrofa [9823]

Cross Reference
UniProt F1S4I7 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSSSCP00000009366 Gene3D G3DSA:3.40.50.10190 IPR001357 400 479 1.60e-24 BRCT domain
ENSSSCP00000009366 Pfam PF00004 IPR003959 647 773 6.10e-14 ATPase, AAA-type, core
ENSSSCP00000009366 Pfam PF00533 IPR001357 402 477 1.00e-15 BRCT domain
ENSSSCP00000009366 Pfam PF08519 IPR013725 914 1069 1.10e-57 DNA replication factor RFC1, C-terminal
ENSSSCP00000009366 PIRSF PIRSF036578 IPR012178 1 1146 0.00e-00 DNA replication factor C, large subunit
ENSSSCP00000009366 ProSiteProfiles PS50172 IPR001357 400 478 0.00e-00 BRCT domain
ENSSSCP00000009366 SMART SM00292 IPR001357 402 480 2.70e-17 BRCT domain
ENSSSCP00000009366 SMART SM00382 IPR003593 642 777 2.80e-12 AAA+ ATPase domain
ENSSSCP00000009366 SUPERFAMILY SSF48019 IPR008921 845 984 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
ENSSSCP00000009366 SUPERFAMILY SSF52113 IPR001357 401 478 0.00e-00 BRCT domain
ENSSSCP00000009366 SUPERFAMILY SSF52540 IPR027417 583 833 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSSSCP00000009366 PF08519 0 RFC1 Replication factor RFC1 C terminal domain
ENSSSCP00000009366 PF00533 1.6e-16 BRCT BRCA1 C Terminus (BRCT) domain
ENSSSCP00000009366 PF00004 2.8e-14 AAA ATPase family associated with various cellular activities (AAA)
ENSSSCP00000009366 PF13207 3.1e-07 AAA_17 AAA domain
ENSSSCP00000009366 PF13401 5.1e-05 AAA_22 AAA domain
ENSSSCP00000009366 PF12738 7.7e-05 PTCB-BRCT twin BRCT domain
ENSSSCP00000009366 PF07728 0.00047 AAA_5 AAA domain (dynein-related subfamily)
ENSSSCP00000009366 PF13173 0.00047 AAA_14 AAA domain
ENSSSCP00000009366 PF05496 0.00055 RuvB_N Holliday junction DNA helicase ruvB N-terminus

Gene Ontology Annotation
Protein Entry Name Space Description
ENSSSCP00000009366 GO:0005634 cellular_component nucleus
ENSSSCP00000009366 GO:0005524 molecular_function ATP binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
400682 Amphimedon queenslandica 100634225 132113 Bombus impatiens 100741454
34638 Metaseiulus occidentalis 100907287 9595 Gorilla gorilla 101133967
9669 Mustela putorius furo 101684848 9615 Canis familiaris 479112
7668 Strongylocentrotus purpuratus 593379 28377 Anolis carolinensis ENSACAG00000007579
7719 Ciona intestinalis ENSCING00000005344 10141 Cavia porcellus ENSCPOG00000004248
9361 Dasypus novemcinctus ENSDNOG00000004694 10020 Dipodomys ordii ENSDORG00000010527
9796 Equus caballus ENSECAG00000024126 69293 Gasterosteus aculeatus ENSGACG00000016149
7897 Latimeria chalumnae ENSLACG00000003000 9785 Loxodonta africana ENSLAFG00000011467
9258 Ornithorhynchus anatinus ENSOANG00000010330 30611 Otolemur garnettii ENSOGAG00000012292
9978 Ochotona princeps ENSOPRG00000009989 9601 Pongo abelii ENSPPYG00000014673
13735 Pelodiscus sinensis ENSPSIG00000008430 42254 Sorex araneus ENSSARG00000012034
7425 Nasonia vitripennis 100119045 7029 Acyrthosiphon pisum 100160866
6087 Hydra magnipapillata 100214385 30195 Bombus terrestris 100648012
9597 Pan paniscus 100973412 9555 Papio anubis 101002449
39432 Saimiri boliviensis 101035144 10090 Mus musculus 19687
7227 Drosophila melanogaster 40607 7070 Tribolium castaneum 656183
9544 Macaca mulatta 698987 9646 Ailuropoda melanoleuca ENSAMEG00000003216
9913 Bos taurus ENSBTAG00000014515 9358 Choloepus hoffmanni ENSCHOG00000012289
9483 Callithrix jacchus ENSCJAG00000033486 51511 Ciona savignyi ENSCSAVG00000000485
9365 Erinaceus europaeus ENSEEUG00000006198 9371 Echinops telfairi ENSETEG00000003990
9685 Felis catus ENSFCAG00000001781 9031 Gallus gallus ENSGALG00000014298
8049 Gadus morhua ENSGMOG00000000960 9315 Macropus eugenii ENSMEUG00000003192
9103 Meleagris gallopavo ENSMGAG00000012310 30608 Microcebus murinus ENSMICG00000016765
59463 Myotis lucifugus ENSMLUG00000013981 13616 Monodelphis domestica ENSMODG00000020548
61853 Nomascus leucogenys ENSNLEG00000017090 9986 Oryctolagus cuniculus ENSOCUG00000004739
8128 Oreochromis niloticus ENSONIG00000008987 8090 Oryzias latipes ENSORLG00000005576
9813 Procavia capensis ENSPCAG00000012348 7757 Petromyzon marinus ENSPMAG00000007814
9598 Pan troglodytes ENSPTRG00000015991 132908 Pteropus vampyrus ENSPVAG00000002121
10116 Rattus norvegicus ENSRNOG00000002855 9305 Sarcophilus harrisii ENSSHAG00000005764
43179 Ictidomys tridecemlineatus ENSSTOG00000007088 99883 Tetraodon nigroviridis ENSTNIG00000005606
31033 Takifugu rubripes ENSTRUG00000008937 9478 Tarsius syrichta ENSTSYG00000013946
8364 Xenopus tropicalis ENSXETG00000012866 37347 Tupaia belangeri ENSTBEG00000003087
59729 Taeniopygia guttata ENSTGUG00000008901 9739 Tursiops truncatus ENSTTRG00000014283
30538 Vicugna pacos ENSVPAG00000002020 8083 Xiphophorus maculatus ENSXMAG00000009566