Basic Information
Gene ID 100706221
Gene Name prdm1
Full Name Uncharacterized protein
Organism Oreochromis niloticus [8128]

Cross Reference
UniProt I3JHV2 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSONIP00000008446 Gene3D G3DSA:3.30.160.60 IPR013087 588 617 1.10e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSONIP00000008446 Gene3D G3DSA:3.30.160.60 IPR013087 618 637 1.10e-12 Zinc finger C2H2-type/integrase DNA-binding domain
ENSONIP00000008446 Gene3D G3DSA:3.30.160.60 IPR013087 638 663 4.00e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSONIP00000008446 Gene3D G3DSA:3.30.160.60 IPR013087 664 695 6.40e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSONIP00000008446 Pfam PF00856 IPR001214 122 222 2.60e-07 SET domain
ENSONIP00000008446 PIRSF PIRSF013212 IPR016608 1 848 0.00e-00 PR-domain zinc finger protein PRDM1
ENSONIP00000008446 ProSitePatterns PS00028 IPR007087 590 610 - Zinc finger, C2H2
ENSONIP00000008446 ProSitePatterns PS00028 IPR007087 618 638 - Zinc finger, C2H2
ENSONIP00000008446 ProSitePatterns PS00028 IPR007087 646 666 - Zinc finger, C2H2
ENSONIP00000008446 ProSitePatterns PS00028 IPR007087 674 694 - Zinc finger, C2H2
ENSONIP00000008446 ProSiteProfiles PS50157 IPR007087 588 615 0.00e-00 Zinc finger, C2H2
ENSONIP00000008446 ProSiteProfiles PS50157 IPR007087 616 643 0.00e-00 Zinc finger, C2H2
ENSONIP00000008446 ProSiteProfiles PS50157 IPR007087 644 671 0.00e-00 Zinc finger, C2H2
ENSONIP00000008446 ProSiteProfiles PS50157 IPR007087 672 699 0.00e-00 Zinc finger, C2H2
ENSONIP00000008446 ProSiteProfiles PS50280 IPR001214 107 223 0.00e-00 SET domain
ENSONIP00000008446 SMART SM00317 IPR001214 107 229 1.90e-16 SET domain
ENSONIP00000008446 SMART SM00355 IPR015880 588 610 7.60e-07 Zinc finger, C2H2-like
ENSONIP00000008446 SMART SM00355 IPR015880 616 638 3.00e-05 Zinc finger, C2H2-like
ENSONIP00000008446 SMART SM00355 IPR015880 644 666 2.50e-05 Zinc finger, C2H2-like
ENSONIP00000008446 SMART SM00355 IPR015880 672 694 4.50e-04 Zinc finger, C2H2-like
ENSONIP00000008446 SMART SM00355 IPR015880 700 720 4.30e-01 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSONIP00000008446 PF13465 1.6e-25 zf-H2C2_2 Zinc-finger double domain
ENSONIP00000008446 PF00096 6.2e-13 zf-C2H2 Zinc finger, C2H2 type
ENSONIP00000008446 PF13894 3.6e-12 zf-C2H2_4 C2H2-type zinc finger
ENSONIP00000008446 PF00856 2.8e-08 SET SET domain
ENSONIP00000008446 PF13912 2.4e-05 zf-C2H2_6 C2H2-type zinc finger
ENSONIP00000008446 PF12171 7.7e-05 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSONIP00000008446 GO:0006351 biological_process transcription, DNA-templated
ENSONIP00000008446 GO:0005634 cellular_component nucleus
ENSONIP00000008446 GO:0003677 molecular_function DNA binding
ENSONIP00000008446 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100071967 7070 Tribolium castaneum 100142159
9823 Sus scrofa 100154284 7029 Acyrthosiphon pisum 100159482
61853 Nomascus leucogenys 100585120 7425 Nasonia vitripennis 100123469
30195 Bombus terrestris 100650488 132113 Bombus impatiens 100741638
10029 Cricetulus griseus 100759446 34638 Metaseiulus occidentalis 100906146
9555 Papio anubis 101009742 9595 Gorilla gorilla 101142019
13735 Pelodiscus sinensis 102454613 10116 Rattus norvegicus 309871
7955 Danio rerio 323473 9031 Gallus gallus 445340
9606 Homo sapiens 639 28377 Anolis carolinensis ENSACAG00000005496
9646 Ailuropoda melanoleuca ENSAMEG00000001482 10020 Dipodomys ordii ENSDORG00000014237
9365 Erinaceus europaeus ENSEEUG00000013222 9371 Echinops telfairi ENSETEG00000019669
9785 Loxodonta africana ENSLAFG00000013436 9315 Macropus eugenii ENSMEUG00000000043
30608 Microcebus murinus ENSMICG00000010329 59463 Myotis lucifugus ENSMLUG00000014085
9258 Ornithorhynchus anatinus ENSOANG00000004176 9978 Ochotona princeps ENSOPRG00000006055
9813 Procavia capensis ENSPCAG00000009179 7757 Petromyzon marinus ENSPMAG00000003606
132908 Pteropus vampyrus ENSPVAG00000011732 42254 Sorex araneus ENSSARG00000004079
59729 Taeniopygia guttata ENSTGUG00000012204 99883 Tetraodon nigroviridis ENSTNIG00000003926
9478 Tarsius syrichta ENSTSYG00000011666 30538 Vicugna pacos ENSVPAG00000011363
8364 Xenopus tropicalis ENSXETG00000008674 8083 Xiphophorus maculatus ENSXMAG00000013351
143995 Megachile rotundata 100877382 30611 Otolemur garnettii 100943698
9597 Pan paniscus 100979416 39432 Saimiri boliviensis 101033194
9669 Mustela putorius furo 101675818 43179 Ictidomys tridecemlineatus 101977297
10090 Mus musculus 12142 7227 Drosophila melanogaster 38638
7460 Apis mellifera 408295 9615 Canis familiaris 481947
7668 Strongylocentrotus purpuratus 751833 9358 Choloepus hoffmanni ENSCHOG00000011220
10141 Cavia porcellus ENSCPOG00000014064 51511 Ciona savignyi ENSCSAVG00000011146
9685 Felis catus ENSFCAG00000010755 69293 Gasterosteus aculeatus ENSGACG00000001740
8049 Gadus morhua ENSGMOG00000009730 9103 Meleagris gallopavo ENSMGAG00000013524
8090 Oryzias latipes ENSORLG00000015684 37347 Tupaia belangeri ENSTBEG00000004089
31033 Takifugu rubripes ENSTRUG00000000404 9739 Tursiops truncatus ENSTTRG00000012894