Basic Information
Gene ID 445340
Gene Name PRDM1
Full Name Uncharacterized protein
Organism Gallus gallus [9031]

Cross Reference
UniProt F1NKI2 UniGene Gga.46807
PDB NULL OMIM NULL
KEGG gga:445340 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSGALP00000024778 Gene3D G3DSA:3.30.160.60 IPR013087 636 665 1.10e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000024778 Gene3D G3DSA:3.30.160.60 IPR013087 666 685 6.00e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000024778 Gene3D G3DSA:3.30.160.60 IPR013087 686 711 7.70e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000024778 Gene3D G3DSA:3.30.160.60 IPR013087 712 738 3.20e-10 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000024778 Gene3D G3DSA:3.30.160.60 IPR013087 739 768 8.90e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSGALP00000024778 Pfam PF00856 IPR001214 161 261 1.40e-07 SET domain
ENSGALP00000024778 PIRSF PIRSF013212 IPR016608 62 886 0.00e-00 PR-domain zinc finger protein PRDM1
ENSGALP00000024778 ProSitePatterns PS00028 IPR007087 638 658 - Zinc finger, C2H2
ENSGALP00000024778 ProSitePatterns PS00028 IPR007087 666 686 - Zinc finger, C2H2
ENSGALP00000024778 ProSitePatterns PS00028 IPR007087 694 714 - Zinc finger, C2H2
ENSGALP00000024778 ProSitePatterns PS00028 IPR007087 722 742 - Zinc finger, C2H2
ENSGALP00000024778 ProSiteProfiles PS50157 IPR007087 636 663 0.00e-00 Zinc finger, C2H2
ENSGALP00000024778 ProSiteProfiles PS50157 IPR007087 664 691 0.00e-00 Zinc finger, C2H2
ENSGALP00000024778 ProSiteProfiles PS50157 IPR007087 692 719 0.00e-00 Zinc finger, C2H2
ENSGALP00000024778 ProSiteProfiles PS50157 IPR007087 720 747 0.00e-00 Zinc finger, C2H2
ENSGALP00000024778 ProSiteProfiles PS50280 IPR001214 146 262 0.00e-00 SET domain
ENSGALP00000024778 SMART SM00317 IPR001214 147 268 2.20e-20 SET domain
ENSGALP00000024778 SMART SM00355 IPR015880 636 658 7.60e-07 Zinc finger, C2H2-like
ENSGALP00000024778 SMART SM00355 IPR015880 664 686 1.30e-05 Zinc finger, C2H2-like
ENSGALP00000024778 SMART SM00355 IPR015880 692 714 2.50e-05 Zinc finger, C2H2-like
ENSGALP00000024778 SMART SM00355 IPR015880 720 742 7.80e-05 Zinc finger, C2H2-like
ENSGALP00000024778 SMART SM00355 IPR015880 748 768 3.40e-01 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSGALP00000024778 PF13465 7.3e-28 zf-H2C2_2 Zinc-finger double domain
ENSGALP00000024778 PF00096 4.1e-14 zf-C2H2 Zinc finger, C2H2 type
ENSGALP00000024778 PF13894 6.2e-13 zf-C2H2_4 C2H2-type zinc finger
ENSGALP00000024778 PF00856 2.6e-08 SET SET domain
ENSGALP00000024778 PF13912 2.8e-05 zf-C2H2_6 C2H2-type zinc finger
ENSGALP00000024778 PF12171 0.00017 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSGALP00000024778 GO:0006351 biological_process transcription, DNA-templated
ENSGALP00000024778 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSGALP00000024778 GO:0005634 cellular_component nucleus
ENSGALP00000024778 GO:0003677 molecular_function DNA binding
ENSGALP00000024778 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSGALP00000024778 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100071967 7070 Tribolium castaneum 100142159
9823 Sus scrofa 100154284 7029 Acyrthosiphon pisum 100159482
61853 Nomascus leucogenys 100585120 8128 Oreochromis niloticus 100706221
10029 Cricetulus griseus 100759446 143995 Megachile rotundata 100877382
34638 Metaseiulus occidentalis 100906146 30611 Otolemur garnettii 100943698
9597 Pan paniscus 100979416 9555 Papio anubis 101009742
39432 Saimiri boliviensis 101033194 9595 Gorilla gorilla 101142019
9669 Mustela putorius furo 101675818 43179 Ictidomys tridecemlineatus 101977297
13735 Pelodiscus sinensis 102454613 10090 Mus musculus 12142
7955 Danio rerio 323473 7227 Drosophila melanogaster 38638
7460 Apis mellifera 408295 7425 Nasonia vitripennis 100123469
9601 Pongo abelii 100452654 30195 Bombus terrestris 100650488
132113 Bombus impatiens 100741638 10116 Rattus norvegicus 309871
9606 Homo sapiens 639 9646 Ailuropoda melanoleuca ENSAMEG00000001482
9371 Echinops telfairi ENSETEG00000019669 9785 Loxodonta africana ENSLAFG00000013436
30608 Microcebus murinus ENSMICG00000010329 9986 Oryctolagus cuniculus ENSOCUG00000016978
9813 Procavia capensis ENSPCAG00000009179 42254 Sorex araneus ENSSARG00000004079
30538 Vicugna pacos ENSVPAG00000011363 9615 Canis familiaris 481947
7668 Strongylocentrotus purpuratus 751833 28377 Anolis carolinensis ENSACAG00000005496
9913 Bos taurus ENSBTAG00000009631 9358 Choloepus hoffmanni ENSCHOG00000011220
9483 Callithrix jacchus ENSCJAG00000009793 10141 Cavia porcellus ENSCPOG00000014064
51511 Ciona savignyi ENSCSAVG00000011146 10020 Dipodomys ordii ENSDORG00000014237
9365 Erinaceus europaeus ENSEEUG00000013222 9685 Felis catus ENSFCAG00000010755
69293 Gasterosteus aculeatus ENSGACG00000001740 8049 Gadus morhua ENSGMOG00000009730
9315 Macropus eugenii ENSMEUG00000000043 9103 Meleagris gallopavo ENSMGAG00000013524
59463 Myotis lucifugus ENSMLUG00000014085 9544 Macaca mulatta ENSMMUG00000003420
13616 Monodelphis domestica ENSMODG00000028134 9258 Ornithorhynchus anatinus ENSOANG00000004176
9978 Ochotona princeps ENSOPRG00000006055 8090 Oryzias latipes ENSORLG00000012948
7757 Petromyzon marinus ENSPMAG00000003606 9598 Pan troglodytes ENSPTRG00000000383
132908 Pteropus vampyrus ENSPVAG00000011732 37347 Tupaia belangeri ENSTBEG00000004089
59729 Taeniopygia guttata ENSTGUG00000012204 99883 Tetraodon nigroviridis ENSTNIG00000012300
31033 Takifugu rubripes ENSTRUG00000000404 9478 Tarsius syrichta ENSTSYG00000011666
9739 Tursiops truncatus ENSTTRG00000012894 8364 Xenopus tropicalis ENSXETG00000008674
8083 Xiphophorus maculatus ENSXMAG00000013351