Basic Information
Gene ID 101033194
Gene Name PRDM1
Full Name PREDICTED: PR domain zinc finger protein 1 [Saimiri boliviensisboliviensis].
Organism Saimiri boliviensis [39432]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_003935974 Gene3D G3DSA:3.30.160.60 IPR013087 575 604 2.00e-14 Zinc finger C2H2-type/integrase DNA-binding domain
XP_003935974 Gene3D G3DSA:3.30.160.60 IPR013087 605 624 5.70e-13 Zinc finger C2H2-type/integrase DNA-binding domain
XP_003935974 Gene3D G3DSA:3.30.160.60 IPR013087 625 650 6.80e-16 Zinc finger C2H2-type/integrase DNA-binding domain
XP_003935974 Gene3D G3DSA:3.30.160.60 IPR013087 651 677 1.50e-10 Zinc finger C2H2-type/integrase DNA-binding domain
XP_003935974 Gene3D G3DSA:3.30.160.60 IPR013087 678 707 5.00e-06 Zinc finger C2H2-type/integrase DNA-binding domain
XP_003935974 Pfam PF00856 IPR001214 100 200 1.30e-07 SET domain
XP_003935974 PIRSF PIRSF013212 IPR016608 2 825 0.00e-00 PR-domain zinc finger protein PRDM1
XP_003935974 ProSitePatterns PS00028 IPR007087 577 597 - Zinc finger, C2H2
XP_003935974 ProSitePatterns PS00028 IPR007087 605 625 - Zinc finger, C2H2
XP_003935974 ProSitePatterns PS00028 IPR007087 633 653 - Zinc finger, C2H2
XP_003935974 ProSitePatterns PS00028 IPR007087 661 681 - Zinc finger, C2H2
XP_003935974 ProSiteProfiles PS50157 IPR007087 575 602 0.00e-00 Zinc finger, C2H2
XP_003935974 ProSiteProfiles PS50157 IPR007087 603 630 0.00e-00 Zinc finger, C2H2
XP_003935974 ProSiteProfiles PS50157 IPR007087 631 658 0.00e-00 Zinc finger, C2H2
XP_003935974 ProSiteProfiles PS50157 IPR007087 659 686 0.00e-00 Zinc finger, C2H2
XP_003935974 ProSiteProfiles PS50280 IPR001214 84 201 0.00e-00 SET domain
XP_003935974 SMART SM00317 IPR001214 87 207 1.10e-21 SET domain
XP_003935974 SMART SM00355 IPR015880 575 597 2.10e-06 Zinc finger, C2H2-like
XP_003935974 SMART SM00355 IPR015880 603 625 1.30e-05 Zinc finger, C2H2-like
XP_003935974 SMART SM00355 IPR015880 631 653 2.50e-05 Zinc finger, C2H2-like
XP_003935974 SMART SM00355 IPR015880 659 681 4.70e-05 Zinc finger, C2H2-like
XP_003935974 SMART SM00355 IPR015880 687 707 6.20e-01 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_003935974 PF13465 2e-27 zf-H2C2_2 Zinc-finger double domain
XP_003935974 PF00096 2.1e-15 zf-C2H2 Zinc finger, C2H2 type
XP_003935974 PF13894 3.4e-13 zf-C2H2_4 C2H2-type zinc finger
XP_003935974 PF00856 2.1e-08 SET SET domain
XP_003935974 PF13912 3.9e-05 zf-C2H2_6 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
XP_003935974 GO:0006351 biological_process transcription, DNA-templated
XP_003935974 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_003935974 GO:0005634 cellular_component nucleus
XP_003935974 GO:0003677 molecular_function DNA binding
XP_003935974 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
XP_003935974 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7070 Tribolium castaneum 100142159 9823 Sus scrofa 100154284
7029 Acyrthosiphon pisum 100159482 30611 Otolemur garnettii 100943698
9796 Equus caballus 100071967 7425 Nasonia vitripennis 100123469
61853 Nomascus leucogenys 100585120 30195 Bombus terrestris 100650488
8128 Oreochromis niloticus 100706221 132113 Bombus impatiens 100741638
10029 Cricetulus griseus 100759446 143995 Megachile rotundata 100877382
34638 Metaseiulus occidentalis 100906146 9597 Pan paniscus 100979416
9555 Papio anubis 101009742 9595 Gorilla gorilla 101142019
9669 Mustela putorius furo 101675818 43179 Ictidomys tridecemlineatus 101977297
13735 Pelodiscus sinensis 102454613 10090 Mus musculus 12142
10116 Rattus norvegicus 309871 7955 Danio rerio 323473
7227 Drosophila melanogaster 38638 9031 Gallus gallus 445340
9606 Homo sapiens 639 7668 Strongylocentrotus purpuratus 751833
28377 Anolis carolinensis ENSACAG00000005496 9646 Ailuropoda melanoleuca ENSAMEG00000001482
51511 Ciona savignyi ENSCSAVG00000011146 10020 Dipodomys ordii ENSDORG00000014237
9365 Erinaceus europaeus ENSEEUG00000013222 9371 Echinops telfairi ENSETEG00000019669
9685 Felis catus ENSFCAG00000010755 69293 Gasterosteus aculeatus ENSGACG00000001740
8049 Gadus morhua ENSGMOG00000009730 9785 Loxodonta africana ENSLAFG00000013436
9315 Macropus eugenii ENSMEUG00000000043 9103 Meleagris gallopavo ENSMGAG00000013524
30608 Microcebus murinus ENSMICG00000010329 59463 Myotis lucifugus ENSMLUG00000014085
9258 Ornithorhynchus anatinus ENSOANG00000004176 9978 Ochotona princeps ENSOPRG00000006055
9813 Procavia capensis ENSPCAG00000009179 7757 Petromyzon marinus ENSPMAG00000004511
132908 Pteropus vampyrus ENSPVAG00000011732 42254 Sorex araneus ENSSARG00000004079
37347 Tupaia belangeri ENSTBEG00000004089 59729 Taeniopygia guttata ENSTGUG00000012204
99883 Tetraodon nigroviridis ENSTNIG00000012300 31033 Takifugu rubripes ENSTRUG00000000404
9478 Tarsius syrichta ENSTSYG00000011666 30538 Vicugna pacos ENSVPAG00000011363
8364 Xenopus tropicalis ENSXETG00000008674 8083 Xiphophorus maculatus ENSXMAG00000013351
7460 Apis mellifera 408295 9615 Canis familiaris 481947
9358 Choloepus hoffmanni ENSCHOG00000011220 10141 Cavia porcellus ENSCPOG00000014064
8090 Oryzias latipes ENSORLG00000012948 9739 Tursiops truncatus ENSTTRG00000012894