Basic Information
Gene ID 102454613
Gene Name PRDM1
Full Name Uncharacterized protein
Organism Pelodiscus sinensis [13735]

Cross Reference
UniProt K7F3X2 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSPSIP00000002732 Gene3D G3DSA:3.30.160.60 IPR013087 537 566 9.80e-15 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPSIP00000002732 Gene3D G3DSA:3.30.160.60 IPR013087 567 586 5.40e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPSIP00000002732 Gene3D G3DSA:3.30.160.60 IPR013087 587 612 6.70e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPSIP00000002732 Gene3D G3DSA:3.30.160.60 IPR013087 613 639 2.80e-10 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPSIP00000002732 Gene3D G3DSA:3.30.160.60 IPR013087 640 669 2.50e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPSIP00000002732 Pfam PF00856 IPR001214 64 164 5.80e-08 SET domain
ENSPSIP00000002732 PIRSF PIRSF013212 IPR016608 1 787 0.00e-00 PR-domain zinc finger protein PRDM1
ENSPSIP00000002732 ProSitePatterns PS00028 IPR007087 539 559 - Zinc finger, C2H2
ENSPSIP00000002732 ProSitePatterns PS00028 IPR007087 567 587 - Zinc finger, C2H2
ENSPSIP00000002732 ProSitePatterns PS00028 IPR007087 595 615 - Zinc finger, C2H2
ENSPSIP00000002732 ProSitePatterns PS00028 IPR007087 623 643 - Zinc finger, C2H2
ENSPSIP00000002732 ProSiteProfiles PS50157 IPR007087 537 564 0.00e-00 Zinc finger, C2H2
ENSPSIP00000002732 ProSiteProfiles PS50157 IPR007087 565 592 0.00e-00 Zinc finger, C2H2
ENSPSIP00000002732 ProSiteProfiles PS50157 IPR007087 593 620 0.00e-00 Zinc finger, C2H2
ENSPSIP00000002732 ProSiteProfiles PS50157 IPR007087 621 648 0.00e-00 Zinc finger, C2H2
ENSPSIP00000002732 ProSiteProfiles PS50280 IPR001214 49 165 0.00e-00 SET domain
ENSPSIP00000002732 SMART SM00317 IPR001214 50 171 6.60e-22 SET domain
ENSPSIP00000002732 SMART SM00355 IPR015880 537 559 7.60e-07 Zinc finger, C2H2-like
ENSPSIP00000002732 SMART SM00355 IPR015880 565 587 1.30e-05 Zinc finger, C2H2-like
ENSPSIP00000002732 SMART SM00355 IPR015880 593 615 2.50e-05 Zinc finger, C2H2-like
ENSPSIP00000002732 SMART SM00355 IPR015880 621 643 7.80e-05 Zinc finger, C2H2-like
ENSPSIP00000002732 SMART SM00355 IPR015880 649 669 5.20e-01 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSPSIP00000002732 PF13465 6.1e-28 zf-H2C2_2 Zinc-finger double domain
ENSPSIP00000002732 PF00096 1.1e-15 zf-C2H2 Zinc finger, C2H2 type
ENSPSIP00000002732 PF13894 1.6e-13 zf-C2H2_4 C2H2-type zinc finger
ENSPSIP00000002732 PF00856 9.3e-09 SET SET domain
ENSPSIP00000002732 PF13912 1.9e-05 zf-C2H2_6 C2H2-type zinc finger
ENSPSIP00000002732 PF12171 6.2e-05 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSPSIP00000002732 GO:0006351 biological_process transcription, DNA-templated
ENSPSIP00000002732 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSPSIP00000002732 GO:0005634 cellular_component nucleus
ENSPSIP00000002732 GO:0003677 molecular_function DNA binding
ENSPSIP00000002732 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100071967 7070 Tribolium castaneum 100142159
9823 Sus scrofa 100154284 7029 Acyrthosiphon pisum 100159482
61853 Nomascus leucogenys 100585120 8128 Oreochromis niloticus 100706221
143995 Megachile rotundata 100877382 34638 Metaseiulus occidentalis 100906146
30611 Otolemur garnettii 100943698 9597 Pan paniscus 100979416
39432 Saimiri boliviensis 101033194 9595 Gorilla gorilla 101142019
9669 Mustela putorius furo 101675818 43179 Ictidomys tridecemlineatus 101977297
7425 Nasonia vitripennis 100123469 9601 Pongo abelii 100452654
30195 Bombus terrestris 100650488 132113 Bombus impatiens 100741638
10029 Cricetulus griseus 100759446 9555 Papio anubis 101009742
10116 Rattus norvegicus 309871 7955 Danio rerio 323473
9031 Gallus gallus 445340 9606 Homo sapiens 639
28377 Anolis carolinensis ENSACAG00000005496 9646 Ailuropoda melanoleuca ENSAMEG00000001482
10020 Dipodomys ordii ENSDORG00000014237 9365 Erinaceus europaeus ENSEEUG00000013222
9371 Echinops telfairi ENSETEG00000019669 69293 Gasterosteus aculeatus ENSGACG00000009358
9785 Loxodonta africana ENSLAFG00000013436 9315 Macropus eugenii ENSMEUG00000000043
30608 Microcebus murinus ENSMICG00000010329 9258 Ornithorhynchus anatinus ENSOANG00000004176
9986 Oryctolagus cuniculus ENSOCUG00000016978 9978 Ochotona princeps ENSOPRG00000006055
9813 Procavia capensis ENSPCAG00000009179 132908 Pteropus vampyrus ENSPVAG00000011732
42254 Sorex araneus ENSSARG00000004079 9478 Tarsius syrichta ENSTSYG00000011666
30538 Vicugna pacos ENSVPAG00000011363 8364 Xenopus tropicalis ENSXETG00000008674
8083 Xiphophorus maculatus ENSXMAG00000013351 10090 Mus musculus 12142
7227 Drosophila melanogaster 38638 7460 Apis mellifera 408295
9615 Canis familiaris 481947 7668 Strongylocentrotus purpuratus 751833
9913 Bos taurus ENSBTAG00000009631 9358 Choloepus hoffmanni ENSCHOG00000011220
9483 Callithrix jacchus ENSCJAG00000009793 10141 Cavia porcellus ENSCPOG00000014064
51511 Ciona savignyi ENSCSAVG00000011146 9685 Felis catus ENSFCAG00000010755
8049 Gadus morhua ENSGMOG00000009730 9103 Meleagris gallopavo ENSMGAG00000013524
59463 Myotis lucifugus ENSMLUG00000014085 9544 Macaca mulatta ENSMMUG00000003420
13616 Monodelphis domestica ENSMODG00000028134 8090 Oryzias latipes ENSORLG00000010025
7757 Petromyzon marinus ENSPMAG00000003606 9598 Pan troglodytes ENSPTRG00000000383
37347 Tupaia belangeri ENSTBEG00000004089 59729 Taeniopygia guttata ENSTGUG00000012204
99883 Tetraodon nigroviridis ENSTNIG00000012300 31033 Takifugu rubripes ENSTRUG00000000404
9739 Tursiops truncatus ENSTTRG00000012894