Basic Information | |||
Gene ID | ENSTGUG00000012204 | ||
Gene Name | PRDM1 | ||
Full Name | Uncharacterized protein | ||
Organism | Taeniopygia guttata [59729] |
Cross Reference | |||
UniProt | H0ZPN4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTGUP00000012569 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 562 | 591 | 1.20e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSTGUP00000012569 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 592 | 611 | 5.50e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSTGUP00000012569 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 612 | 637 | 7.00e-16 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSTGUP00000012569 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 638 | 664 | 2.90e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSTGUP00000012569 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 665 | 694 | 8.00e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSTGUP00000012569 | Pfam | PF00856 | IPR001214 | 87 | 187 | 4.90e-07 | SET domain |
ENSTGUP00000012569 | PIRSF | PIRSF013212 | IPR016608 | 1 | 812 | 0.00e-00 | PR-domain zinc finger protein PRDM1 |
ENSTGUP00000012569 | ProSitePatterns | PS00028 | IPR007087 | 564 | 584 | - | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSitePatterns | PS00028 | IPR007087 | 592 | 612 | - | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSitePatterns | PS00028 | IPR007087 | 620 | 640 | - | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSitePatterns | PS00028 | IPR007087 | 648 | 668 | - | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSiteProfiles | PS50157 | IPR007087 | 562 | 589 | 0.00e-00 | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSiteProfiles | PS50157 | IPR007087 | 590 | 617 | 0.00e-00 | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSiteProfiles | PS50157 | IPR007087 | 618 | 645 | 0.00e-00 | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSiteProfiles | PS50157 | IPR007087 | 646 | 673 | 0.00e-00 | Zinc finger, C2H2 |
ENSTGUP00000012569 | ProSiteProfiles | PS50280 | IPR001214 | 72 | 188 | 0.00e-00 | SET domain |
ENSTGUP00000012569 | SMART | SM00317 | IPR001214 | 73 | 194 | 3.50e-18 | SET domain |
ENSTGUP00000012569 | SMART | SM00355 | IPR015880 | 562 | 584 | 7.60e-07 | Zinc finger, C2H2-like |
ENSTGUP00000012569 | SMART | SM00355 | IPR015880 | 590 | 612 | 1.30e-05 | Zinc finger, C2H2-like |
ENSTGUP00000012569 | SMART | SM00355 | IPR015880 | 618 | 640 | 2.50e-05 | Zinc finger, C2H2-like |
ENSTGUP00000012569 | SMART | SM00355 | IPR015880 | 646 | 668 | 7.80e-05 | Zinc finger, C2H2-like |
ENSTGUP00000012569 | SMART | SM00355 | IPR015880 | 674 | 694 | 3.40e-01 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTGUP00000012569 | PF13465 | 4e-28 | zf-H2C2_2 | Zinc-finger double domain |
ENSTGUP00000012569 | PF00096 | 2.6e-14 | zf-C2H2 | Zinc finger, C2H2 type |
ENSTGUP00000012569 | PF13894 | 4.7e-13 | zf-C2H2_4 | C2H2-type zinc finger |
ENSTGUP00000012569 | PF00856 | 9.6e-08 | SET | SET domain |
ENSTGUP00000012569 | PF13912 | 2.1e-05 | zf-C2H2_6 | C2H2-type zinc finger |
ENSTGUP00000012569 | PF12171 | 0.0001 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTGUP00000012569 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTGUP00000012569 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTGUP00000012569 | GO:0005634 | cellular_component | nucleus |
ENSTGUP00000012569 | GO:0003677 | molecular_function | DNA binding |
ENSTGUP00000012569 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSTGUP00000012569 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100071967 | 7070 | Tribolium castaneum | 100142159 |
9823 | Sus scrofa | 100154284 | 7029 | Acyrthosiphon pisum | 100159482 |
61853 | Nomascus leucogenys | 100585120 | 8128 | Oreochromis niloticus | 100706221 |
143995 | Megachile rotundata | 100877382 | 30611 | Otolemur garnettii | 100943698 |
9597 | Pan paniscus | 100979416 | 39432 | Saimiri boliviensis | 101033194 |
9669 | Mustela putorius furo | 101675818 | 43179 | Ictidomys tridecemlineatus | 101977297 |
10090 | Mus musculus | 12142 | 7227 | Drosophila melanogaster | 38638 |
7460 | Apis mellifera | 408295 | 9615 | Canis familiaris | 481947 |
7668 | Strongylocentrotus purpuratus | 751833 | 9913 | Bos taurus | ENSBTAG00000009631 |
9358 | Choloepus hoffmanni | ENSCHOG00000011220 | 9483 | Callithrix jacchus | ENSCJAG00000009793 |
10141 | Cavia porcellus | ENSCPOG00000014064 | 51511 | Ciona savignyi | ENSCSAVG00000011146 |
9685 | Felis catus | ENSFCAG00000010755 | 8049 | Gadus morhua | ENSGMOG00000009730 |
9103 | Meleagris gallopavo | ENSMGAG00000013524 | 59463 | Myotis lucifugus | ENSMLUG00000014085 |
9544 | Macaca mulatta | ENSMMUG00000003420 | 13616 | Monodelphis domestica | ENSMODG00000028134 |
8090 | Oryzias latipes | ENSORLG00000012948 | 9598 | Pan troglodytes | ENSPTRG00000000383 |
37347 | Tupaia belangeri | ENSTBEG00000004089 | 7425 | Nasonia vitripennis | 100123469 |
9601 | Pongo abelii | 100452654 | 30195 | Bombus terrestris | 100650488 |
132113 | Bombus impatiens | 100741638 | 10029 | Cricetulus griseus | 100759446 |
34638 | Metaseiulus occidentalis | 100906146 | 9555 | Papio anubis | 101009742 |
9595 | Gorilla gorilla | 101142019 | 13735 | Pelodiscus sinensis | 102454613 |
10116 | Rattus norvegicus | 309871 | 7955 | Danio rerio | 323473 |
9031 | Gallus gallus | 445340 | 9606 | Homo sapiens | 639 |
28377 | Anolis carolinensis | ENSACAG00000005496 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000001482 |
10020 | Dipodomys ordii | ENSDORG00000014237 | 9365 | Erinaceus europaeus | ENSEEUG00000013222 |
9371 | Echinops telfairi | ENSETEG00000019669 | 69293 | Gasterosteus aculeatus | ENSGACG00000009358 |
9785 | Loxodonta africana | ENSLAFG00000013436 | 9315 | Macropus eugenii | ENSMEUG00000000043 |
30608 | Microcebus murinus | ENSMICG00000010329 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004176 |
9986 | Oryctolagus cuniculus | ENSOCUG00000016978 | 9978 | Ochotona princeps | ENSOPRG00000006055 |
9813 | Procavia capensis | ENSPCAG00000009179 | 7757 | Petromyzon marinus | ENSPMAG00000003606 |
132908 | Pteropus vampyrus | ENSPVAG00000011732 | 42254 | Sorex araneus | ENSSARG00000004079 |
9478 | Tarsius syrichta | ENSTSYG00000011666 | 30538 | Vicugna pacos | ENSVPAG00000011363 |
8364 | Xenopus tropicalis | ENSXETG00000008674 | 8083 | Xiphophorus maculatus | ENSXMAG00000013351 |
99883 | Tetraodon nigroviridis | ENSTNIG00000012300 | 31033 | Takifugu rubripes | ENSTRUG00000000404 |
9739 | Tursiops truncatus | ENSTTRG00000012894 |