Basic Information | |||
Gene ID | 639 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | PRDM1; BLIMP1 | ||
Full Name | PR domain zinc finger protein 1 | ||
Organism | Homo sapiens [9606] |
Cross Reference | |||
UniProt | O75626 | UniGene | Hs.436023 |
PDB | 3DAL | OMIM | 603423 |
KEGG | hsa:639 | UCSC | uc003pre.3 |
Protein Interactions | |
DIP | NULL |
IntAct | O75626 |
MINT | MINT-2857156 |
STRING | 9606.ENSP00000358092 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSP00000358092 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 575 | 604 | 2.00e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSP00000358092 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 605 | 624 | 5.70e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSP00000358092 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 625 | 650 | 6.80e-16 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSP00000358092 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 651 | 677 | 1.50e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSP00000358092 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 678 | 707 | 2.20e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSP00000358092 | Pfam | PF00856 | IPR001214 | 100 | 200 | 1.60e-07 | SET domain |
ENSP00000358092 | PIRSF | PIRSF013212 | IPR016608 | 2 | 825 | 0.00e-00 | PR-domain zinc finger protein PRDM1 |
ENSP00000358092 | ProSitePatterns | PS00028 | IPR007087 | 577 | 597 | - | Zinc finger, C2H2 |
ENSP00000358092 | ProSitePatterns | PS00028 | IPR007087 | 605 | 625 | - | Zinc finger, C2H2 |
ENSP00000358092 | ProSitePatterns | PS00028 | IPR007087 | 633 | 653 | - | Zinc finger, C2H2 |
ENSP00000358092 | ProSitePatterns | PS00028 | IPR007087 | 661 | 681 | - | Zinc finger, C2H2 |
ENSP00000358092 | ProSiteProfiles | PS50157 | IPR007087 | 575 | 602 | 0.00e-00 | Zinc finger, C2H2 |
ENSP00000358092 | ProSiteProfiles | PS50157 | IPR007087 | 603 | 630 | 0.00e-00 | Zinc finger, C2H2 |
ENSP00000358092 | ProSiteProfiles | PS50157 | IPR007087 | 631 | 658 | 0.00e-00 | Zinc finger, C2H2 |
ENSP00000358092 | ProSiteProfiles | PS50157 | IPR007087 | 659 | 686 | 0.00e-00 | Zinc finger, C2H2 |
ENSP00000358092 | ProSiteProfiles | PS50280 | IPR001214 | 84 | 201 | 0.00e-00 | SET domain |
ENSP00000358092 | SMART | SM00317 | IPR001214 | 86 | 207 | 2.50e-24 | SET domain |
ENSP00000358092 | SMART | SM00355 | IPR015880 | 575 | 597 | 2.10e-06 | Zinc finger, C2H2-like |
ENSP00000358092 | SMART | SM00355 | IPR015880 | 603 | 625 | 1.30e-05 | Zinc finger, C2H2-like |
ENSP00000358092 | SMART | SM00355 | IPR015880 | 631 | 653 | 2.50e-05 | Zinc finger, C2H2-like |
ENSP00000358092 | SMART | SM00355 | IPR015880 | 659 | 681 | 4.70e-05 | Zinc finger, C2H2-like |
ENSP00000358092 | SMART | SM00355 | IPR015880 | 687 | 707 | 4.30e-01 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSP00000358092 | PF13465 | 7.4e-28 | zf-H2C2_2 | Zinc-finger double domain |
ENSP00000358092 | PF00096 | 4.2e-15 | zf-C2H2 | Zinc finger, C2H2 type |
ENSP00000358092 | PF13894 | 4.7e-14 | zf-C2H2_4 | C2H2-type zinc finger |
ENSP00000358092 | PF00856 | 2.9e-08 | SET | SET domain |
ENSP00000358092 | PF13912 | 2.9e-05 | zf-C2H2_6 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSP00000358092 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSP00000358092 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSP00000358092 | GO:0005634 | cellular_component | nucleus |
ENSP00000358092 | GO:0003677 | molecular_function | DNA binding |
ENSP00000358092 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100071967 | 7070 | Tribolium castaneum | 100142159 |
9823 | Sus scrofa | 100154284 | 7029 | Acyrthosiphon pisum | 100159482 |
61853 | Nomascus leucogenys | 100585120 | 30195 | Bombus terrestris | 100650488 |
8128 | Oreochromis niloticus | 100706221 | 10029 | Cricetulus griseus | 100759446 |
143995 | Megachile rotundata | 100877382 | 34638 | Metaseiulus occidentalis | 100906146 |
30611 | Otolemur garnettii | 100943698 | 9597 | Pan paniscus | 100979416 |
9555 | Papio anubis | 101009742 | 39432 | Saimiri boliviensis | 101033194 |
9595 | Gorilla gorilla | 101142019 | 9669 | Mustela putorius furo | 101675818 |
43179 | Ictidomys tridecemlineatus | 101977297 | 13735 | Pelodiscus sinensis | 102454613 |
10090 | Mus musculus | 12142 | 7955 | Danio rerio | 323473 |
7227 | Drosophila melanogaster | 38638 | 7460 | Apis mellifera | 408295 |
9031 | Gallus gallus | 445340 | 9615 | Canis familiaris | 481947 |
7425 | Nasonia vitripennis | 100123469 | 132113 | Bombus impatiens | 100741638 |
10116 | Rattus norvegicus | 309871 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000001482 |
9785 | Loxodonta africana | ENSLAFG00000013436 | 42254 | Sorex araneus | ENSSARG00000004079 |
30538 | Vicugna pacos | ENSVPAG00000011363 | 7668 | Strongylocentrotus purpuratus | 751833 |
28377 | Anolis carolinensis | ENSACAG00000005496 | 9358 | Choloepus hoffmanni | ENSCHOG00000011220 |
10141 | Cavia porcellus | ENSCPOG00000014064 | 51511 | Ciona savignyi | ENSCSAVG00000011146 |
10020 | Dipodomys ordii | ENSDORG00000014237 | 9365 | Erinaceus europaeus | ENSEEUG00000013222 |
9371 | Echinops telfairi | ENSETEG00000019669 | 9685 | Felis catus | ENSFCAG00000010755 |
69293 | Gasterosteus aculeatus | ENSGACG00000001740 | 8049 | Gadus morhua | ENSGMOG00000009730 |
9315 | Macropus eugenii | ENSMEUG00000000043 | 9103 | Meleagris gallopavo | ENSMGAG00000013524 |
30608 | Microcebus murinus | ENSMICG00000010329 | 59463 | Myotis lucifugus | ENSMLUG00000014085 |
9258 | Ornithorhynchus anatinus | ENSOANG00000004176 | 9978 | Ochotona princeps | ENSOPRG00000006055 |
8090 | Oryzias latipes | ENSORLG00000012948 | 9813 | Procavia capensis | ENSPCAG00000009179 |
7757 | Petromyzon marinus | ENSPMAG00000004511 | 132908 | Pteropus vampyrus | ENSPVAG00000011732 |
37347 | Tupaia belangeri | ENSTBEG00000004089 | 59729 | Taeniopygia guttata | ENSTGUG00000012204 |
99883 | Tetraodon nigroviridis | ENSTNIG00000012300 | 31033 | Takifugu rubripes | ENSTRUG00000000404 |
9478 | Tarsius syrichta | ENSTSYG00000011666 | 9739 | Tursiops truncatus | ENSTTRG00000012894 |
8364 | Xenopus tropicalis | ENSXETG00000008674 | 8083 | Xiphophorus maculatus | ENSXMAG00000013351 |