Basic Information | |||
Gene ID | 101037370 | ||
Gene Name | SOX2 | ||
Full Name | PREDICTED: transcription factor SOX-2 [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003927192 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 46 | 112 | 6.00e-30 | High mobility group box domain |
XP_003927192 | Pfam | PF00505 | IPR009071 | 47 | 102 | 2.80e-18 | High mobility group box domain |
XP_003927192 | Pfam | PF12336 | IPR022097 | 103 | 193 | 6.10e-30 | Transcription factor SOX |
XP_003927192 | ProSiteProfiles | PS50118 | IPR009071 | 48 | 102 | 0.00e-00 | High mobility group box domain |
XP_003927192 | SMART | SM00398 | IPR009071 | 44 | 103 | 6.00e-15 | High mobility group box domain |
XP_003927192 | SUPERFAMILY | SSF47095 | IPR009071 | 48 | 119 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003927192 | PF12336 | 6.1e-30 | SOXp | SOX transcription factor |
XP_003927192 | PF00505 | 1.7e-18 | HMG_box | HMG (high mobility group) box |
XP_003927192 | PF09011 | 4.1e-07 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003927192 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003927192 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003927192 | GO:0007275 | biological_process | multicellular organismal development |
XP_003927192 | GO:0005634 | cellular_component | nucleus |
XP_003927192 | GO:0003677 | molecular_function | DNA binding |
XP_003927192 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9601 | Pongo abelii | 100460719 | 10029 | Cricetulus griseus | 100759815 |
9555 | Papio anubis | 101022620 | 10224 | Saccoglossus kowalevskii | 100303496 |
8128 | Oreochromis niloticus | 100695175 | 30611 | Otolemur garnettii | 100963354 |
31033 | Takifugu rubripes | 101073272 | 8090 | Oryzias latipes | 101162114 |
8083 | Xiphophorus maculatus | 102226408 | 7897 | Latimeria chalumnae | 102366157 |
8364 | Xenopus tropicalis | 407873 | 7955 | Danio rerio | 436756 |
9598 | Pan troglodytes | 460869 | 10116 | Rattus norvegicus | 499593 |
9913 | Bos taurus | 618135 | 10141 | Cavia porcellus | ENSCPOG00000008309 |
9361 | Dasypus novemcinctus | ENSDNOG00000019903 | 9371 | Echinops telfairi | ENSETEG00000006366 |
9595 | Gorilla gorilla | ENSGGOG00000027572 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004458 |
9986 | Oryctolagus cuniculus | ENSOCUG00000011135 | 9813 | Procavia capensis | ENSPCAG00000003690 |
9823 | Sus scrofa | ENSSSCG00000011771 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000011011 |
99883 | Tetraodon nigroviridis | ENSTNIG00000003970 | 9478 | Tarsius syrichta | ENSTSYG00000001164 |
9739 | Tursiops truncatus | ENSTTRG00000004853 | 13735 | Pelodiscus sinensis | 102443720 |
7668 | Strongylocentrotus purpuratus | 373202 | 9031 | Gallus gallus | 396105 |
9615 | Canis familiaris | 488092 | 9606 | Homo sapiens | 6657 |
9544 | Macaca mulatta | 696412 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000011029 |
9483 | Callithrix jacchus | ENSCJAG00000008401 | 10020 | Dipodomys ordii | ENSDORG00000007481 |
9796 | Equus caballus | ENSECAG00000010653 | 9685 | Felis catus | ENSFCAG00000029205 |
69293 | Gasterosteus aculeatus | ENSGACG00000006100 | 8049 | Gadus morhua | ENSGMOG00000019777 |
9785 | Loxodonta africana | ENSLAFG00000030155 | 59463 | Myotis lucifugus | ENSMLUG00000013015 |
13616 | Monodelphis domestica | ENSMODG00000021292 | 9305 | Sarcophilus harrisii | ENSSHAG00000007719 |
30538 | Vicugna pacos | ENSVPAG00000010334 |