Basic Information
Gene ID 373202
Gene Name SoxB1; Sp-Soxb1
Full Name Transcription factor SoxB1
Organism Strongylocentrotus purpuratus [7668]

Cross Reference
UniProt Q9Y0D7 UniGene Spu.25940
PDB NULL OMIM NULL
KEGG spu:373202 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7668.Q9Y0D7

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_999639 Gene3D G3DSA:1.10.30.10 IPR009071 60 139 2.20e-40 High mobility group box domain
NP_999639 Pfam PF00505 IPR009071 61 129 5.70e-27 High mobility group box domain
NP_999639 Pfam PF12336 IPR022097 130 213 1.40e-40 Transcription factor SOX
NP_999639 ProSiteProfiles PS50118 IPR009071 61 129 0.00e-00 High mobility group box domain
NP_999639 SMART SM00398 IPR009071 60 130 6.80e-32 High mobility group box domain
NP_999639 SUPERFAMILY SSF47095 IPR009071 51 133 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_999639 PF12336 1.4e-40 SOXp SOX transcription factor
NP_999639 PF00505 3.1e-27 HMG_box HMG (high mobility group) box
NP_999639 PF09011 8.1e-12 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_999639 GO:0006351 biological_process transcription, DNA-templated
NP_999639 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_999639 GO:0007275 biological_process multicellular organismal development
NP_999639 GO:0005634 cellular_component nucleus
NP_999639 GO:0003677 molecular_function DNA binding
NP_999639 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9601 Pongo abelii 100460719 10029 Cricetulus griseus 100759815
6087 Hydra magnipapillata 100205840 10224 Saccoglossus kowalevskii 100303496
400682 Amphimedon queenslandica 100632156 8128 Oreochromis niloticus 100695175
7463 Apis florea 100866912 30611 Otolemur garnettii 100963354
9555 Papio anubis 101022620 39432 Saimiri boliviensis 101037370
31033 Takifugu rubripes 101073272 8090 Oryzias latipes 101162114
8083 Xiphophorus maculatus 102226408 7897 Latimeria chalumnae 102366157
13735 Pelodiscus sinensis 102443720 9031 Gallus gallus 396105
8364 Xenopus tropicalis 407873 7955 Danio rerio 436756
9598 Pan troglodytes 460869 9615 Canis familiaris 488092
10116 Rattus norvegicus 499593 7070 Tribolium castaneum 663351
9606 Homo sapiens 6657 9646 Ailuropoda melanoleuca ENSAMEG00000011029
10141 Cavia porcellus ENSCPOG00000022456 9361 Dasypus novemcinctus ENSDNOG00000019903
10020 Dipodomys ordii ENSDORG00000007481 9796 Equus caballus ENSECAG00000010653
9371 Echinops telfairi ENSETEG00000006366 9595 Gorilla gorilla ENSGGOG00000027572
8049 Gadus morhua ENSGMOG00000020190 9785 Loxodonta africana ENSLAFG00000030155
59463 Myotis lucifugus ENSMLUG00000013015 13616 Monodelphis domestica ENSMODG00000021292
9258 Ornithorhynchus anatinus ENSOANG00000004458 9986 Oryctolagus cuniculus ENSOCUG00000011135
9978 Ochotona princeps ENSOPRG00000017106 9813 Procavia capensis ENSPCAG00000009165
9823 Sus scrofa ENSSSCG00000011771 43179 Ictidomys tridecemlineatus ENSSTOG00000011011
99883 Tetraodon nigroviridis ENSTNIG00000003970 9478 Tarsius syrichta ENSTSYG00000001164
9739 Tursiops truncatus ENSTTRG00000004853 9544 Macaca mulatta 696412
9483 Callithrix jacchus ENSCJAG00000008401 9365 Erinaceus europaeus ENSEEUG00000013305
9685 Felis catus ENSFCAG00000029205 69293 Gasterosteus aculeatus ENSGACG00000006100
9305 Sarcophilus harrisii ENSSHAG00000007719 30538 Vicugna pacos ENSVPAG00000010334

Paralogs
373201