Basic Information
Gene ID ENSTNIG00000003970
Gene Name SOX2; GSTENG00006460001
Full Name Chromosome undetermined SCAF8903, whole genome shotgun sequence
Organism Tetraodon nigroviridis [99883]

Cross Reference
UniProt Q4T665 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSTNIP00000006579 Gene3D G3DSA:1.10.30.10 IPR009071 38 118 1.30e-40 High mobility group box domain
ENSTNIP00000006579 Pfam PF00505 IPR009071 40 108 1.00e-26 High mobility group box domain
ENSTNIP00000006579 Pfam PF12336 IPR022097 109 201 1.80e-22 Transcription factor SOX
ENSTNIP00000006579 ProSiteProfiles PS50118 IPR009071 40 108 0.00e-00 High mobility group box domain
ENSTNIP00000006579 SMART SM00398 IPR009071 39 109 4.90e-31 High mobility group box domain
ENSTNIP00000006579 SUPERFAMILY SSF47095 IPR009071 27 112 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSTNIP00000006579 PF00505 1e-26 HMG_box HMG (high mobility group) box
ENSTNIP00000006579 PF12336 1.8e-22 SOXp SOX transcription factor
ENSTNIP00000006579 PF09011 1.7e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSTNIP00000006579 GO:0006351 biological_process transcription, DNA-templated
ENSTNIP00000006579 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSTNIP00000006579 GO:0007275 biological_process multicellular organismal development
ENSTNIP00000006579 GO:0005634 cellular_component nucleus
ENSTNIP00000006579 GO:0003677 molecular_function DNA binding
ENSTNIP00000006579 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
6087 Hydra magnipapillata 100205840 9601 Pongo abelii 100460719
10029 Cricetulus griseus 100759815 9555 Papio anubis 101022620
39432 Saimiri boliviensis 101037370 13735 Pelodiscus sinensis 102443720
7668 Strongylocentrotus purpuratus 373202 9031 Gallus gallus 396105
8364 Xenopus tropicalis 407873 9615 Canis familiaris 488092
10116 Rattus norvegicus 499593 7070 Tribolium castaneum 663351
9606 Homo sapiens 6657 9646 Ailuropoda melanoleuca ENSAMEG00000011029
9483 Callithrix jacchus ENSCJAG00000008401 10020 Dipodomys ordii ENSDORG00000007481
9796 Equus caballus ENSECAG00000010653 9371 Echinops telfairi ENSETEG00000006366
9685 Felis catus ENSFCAG00000029205 69293 Gasterosteus aculeatus ENSGACG00000006100
8049 Gadus morhua ENSGMOG00000019777 59463 Myotis lucifugus ENSMLUG00000013015
13616 Monodelphis domestica ENSMODG00000021292 9986 Oryctolagus cuniculus ENSOCUG00000011135
7757 Petromyzon marinus ENSPMAG00000009737 9823 Sus scrofa ENSSSCG00000011771
7029 Acyrthosiphon pisum 100164548 7425 Nasonia vitripennis 100678051
8128 Oreochromis niloticus 100695175 30611 Otolemur garnettii 100963354
31033 Takifugu rubripes 101073272 8090 Oryzias latipes 101162114
8083 Xiphophorus maculatus 102226408 7897 Latimeria chalumnae 102366157
9598 Pan troglodytes 460869 7719 Ciona intestinalis ENSCING00000006005
9361 Dasypus novemcinctus ENSDNOG00000019903 9595 Gorilla gorilla ENSGGOG00000027572
9258 Ornithorhynchus anatinus ENSOANG00000004458 9813 Procavia capensis ENSPCAG00000003690
43179 Ictidomys tridecemlineatus ENSSTOG00000011011 9478 Tarsius syrichta ENSTSYG00000001164
9739 Tursiops truncatus ENSTTRG00000004853 30538 Vicugna pacos ENSVPAG00000010334

Paralogs
ENSTNIG00000006369