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| Ticket ID | Summary | Date | Assigned to | Submitted by |
| 176 | includes at least one deprecated or antiquated header.. | 02/07/04 04:48 | unset | dmb |
| 177 | Handling X character (mask) in sequences | 02/07/04 08:31 | liwz | dmb |
| 178 | -M problems on some systems | 02/07/04 08:35 | unset | dmb |
| 179 | Problem with fractional sequence identity (in percent) | 02/07/04 08:40 | unset | dmb |
| 180 | ouput switch? | 02/07/04 08:42 | liwz | dmb |
| 181 | test | 02/09/04 20:30 | dmb | dmb |
| 184 | Documents lack details! | 05/21/04 06:13 | dmb | dmb |
| 192 | Suggested parameters cause an error! | 08/13/04 11:02 | liwz | dmb |
| 193 | when -o is missing default behaviour is strange | 08/16/04 15:51 | unset | unset |
| 194 | when -i = -o you clobber your fasta file | 08/16/04 15:54 | unset | unset |
| 195 | Longest sequence first??? | 08/19/04 07:28 | liwz | dmb |
| 196 | Propper handeling of gap characters | 08/24/04 17:15 | unset | dmb |
| 220 | N-terminal truncated sequence not clustered correctly at 100 | 05/24/05 11:15 | liwz | dmb |
| 221 | N-terminal truncated sequence not clustered correctly at 100 | 05/24/05 11:16 | unset | dmb |
| 324 | compiling CD-Hit under x86_64-suse-linux: not possible ! | 11/22/06 10:13 | unset | unset |
| 380 | MCD-hit segmentation fault | 05/15/07 06:26 | unset | unset |
| 381 | MCD-hit segmentation fault | 05/15/07 07:55 | unset | unset |
| 399 | 08/02/07 08:35 | unset | unset | |
| 400 | wrong identity in clustered group | 08/06/07 19:35 | unset | unset |
| 451 | failing when long gene description | 05/06/08 10:25 | unset | unset |
| 452 | CD-HIT HANGING | 05/06/08 10:37 | unset | unset |
| 453 | failing when long gene description | 05/06/08 10:48 | unset | unset |
| 459 | Unable to download program | 06/23/08 15:58 | unset | unset |
| 1100 | trouble with large fasta files | 09/02/09 10:52 | unset | confused |
| 1101 | hangs when I use sequence coverage arguments | 09/29/09 06:50 | unset | confused |
| 1102 | hangs when I use sequence coverage arguments | 09/29/09 07:05 | unset | confused |
| 1103 | CD-HIT Segmentation fault whilst writing new database | 10/02/09 07:44 | unset | gawbul |
| 1106 | 09/10/10 06:44 | unset | jtamames | |
| 1107 | long sequences and 64 bit | 01/18/11 01:27 | unset | alpapan |
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