Basic Information
Gene ID 100009761
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Monodelphis domestica [13616]

Cross Reference
UniProt K7E2B4 UniGene NULL
PDB NULL OMIM NULL
KEGG mdo:100009761 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 185 253 1.50e-26 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 25 93 1.60e-25 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 348 418 1.50e-24 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 457 514 2.20e-08 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 518 582 3.60e-21 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Gene3D G3DSA:2.40.50.140 IPR012340 677 742 8.40e-21 Nucleic acid-binding, OB-fold
ENSMODP00000039915 Pfam PF00313 IPR002059 186 247 1.90e-16 Cold-shock protein, DNA-binding
ENSMODP00000039915 Pfam PF00313 IPR002059 27 89 1.10e-14 Cold-shock protein, DNA-binding
ENSMODP00000039915 Pfam PF00313 IPR002059 351 411 7.30e-09 Cold-shock protein, DNA-binding
ENSMODP00000039915 Pfam PF00313 IPR002059 521 581 9.40e-15 Cold-shock protein, DNA-binding
ENSMODP00000039915 Pfam PF00313 IPR002059 675 737 4.10e-15 Cold-shock protein, DNA-binding
ENSMODP00000039915 Pfam PF12901 IPR024642 756 789 3.40e-13 SUZ-C domain
ENSMODP00000039915 ProSitePatterns PS00352 IPR019844 197 216 - Cold-shock conserved site
ENSMODP00000039915 ProSitePatterns PS00352 IPR019844 360 379 - Cold-shock conserved site
ENSMODP00000039915 ProSitePatterns PS00352 IPR019844 37 56 - Cold-shock conserved site
ENSMODP00000039915 ProSitePatterns PS00352 IPR019844 530 549 - Cold-shock conserved site
ENSMODP00000039915 SMART SM00357 IPR011129 187 248 3.60e-21 Cold shock protein
ENSMODP00000039915 SMART SM00357 IPR011129 27 90 8.30e-19 Cold shock protein
ENSMODP00000039915 SMART SM00357 IPR011129 350 413 2.20e-17 Cold shock protein
ENSMODP00000039915 SMART SM00357 IPR011129 520 582 2.40e-17 Cold shock protein
ENSMODP00000039915 SMART SM00357 IPR011129 675 738 8.90e-19 Cold shock protein
ENSMODP00000039915 SUPERFAMILY SSF50249 IPR012340 17 93 0.00e-00 Nucleic acid-binding, OB-fold
ENSMODP00000039915 SUPERFAMILY SSF50249 IPR012340 183 253 0.00e-00 Nucleic acid-binding, OB-fold
ENSMODP00000039915 SUPERFAMILY SSF50249 IPR012340 336 417 0.00e-00 Nucleic acid-binding, OB-fold
ENSMODP00000039915 SUPERFAMILY SSF50249 IPR012340 510 582 0.00e-00 Nucleic acid-binding, OB-fold
ENSMODP00000039915 SUPERFAMILY SSF50249 IPR012340 661 741 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMODP00000039915 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSMODP00000039915 PF14444 1.8e-14 S1-like S1-like
ENSMODP00000039915 PF12901 1.5e-13 SUZ-C SUZ-C motif
ENSMODP00000039915 PF11604 1.1e-07 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMODP00000039915 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSMODP00000039915 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSMODP00000039915 GO:0005737 cellular_component cytoplasm
ENSMODP00000039915 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSMODP00000039915 GO:0003677 molecular_function DNA binding
ENSMODP00000039915 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100123206 61853 Nomascus leucogenys 100590871
400682 Amphimedon queenslandica 100631963 8128 Oreochromis niloticus 100701469
34638 Metaseiulus occidentalis 100908518 9597 Pan paniscus 100968628
9555 Papio anubis 101024024 39432 Saimiri boliviensis 101034862
9595 Gorilla gorilla 101146917 59463 Myotis lucifugus 102429010
7070 Tribolium castaneum 655517 9606 Homo sapiens 7812
9646 Ailuropoda melanoleuca ENSAMEG00000017129 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 7719 Ciona intestinalis ENSCING00000014465
9483 Callithrix jacchus ENSCJAG00000012565 51511 Ciona savignyi ENSCSAVG00000008100
9361 Dasypus novemcinctus ENSDNOG00000010287 10020 Dipodomys ordii ENSDORG00000011609
9796 Equus caballus ENSECAG00000020885 9371 Echinops telfairi ENSETEG00000006280
9685 Felis catus ENSFCAG00000029266 69293 Gasterosteus aculeatus ENSGACG00000004544
9031 Gallus gallus ENSGALG00000002139 8049 Gadus morhua ENSGMOG00000012731
9785 Loxodonta africana ENSLAFG00000007150 9315 Macropus eugenii ENSMEUG00000002677
9103 Meleagris gallopavo ENSMGAG00000016381 9258 Ornithorhynchus anatinus ENSOANG00000003346
8090 Oryzias latipes ENSORLG00000000707 9813 Procavia capensis ENSPCAG00000014368
9601 Pongo abelii ENSPPYG00000000996 13735 Pelodiscus sinensis ENSPSIG00000003823
132908 Pteropus vampyrus ENSPVAG00000008225 42254 Sorex araneus ENSSARG00000000738
9823 Sus scrofa ENSSSCG00000006752 59729 Taeniopygia guttata ENSTGUG00000000972
99883 Tetraodon nigroviridis ENSTNIG00000010878 31033 Takifugu rubripes ENSTRUG00000007996
9478 Tarsius syrichta ENSTSYG00000003747 9739 Tursiops truncatus ENSTTRG00000015583
30538 Vicugna pacos ENSVPAG00000000749 8083 Xiphophorus maculatus ENSXMAG00000009080
10090 Mus musculus 229663 9365 Erinaceus europaeus ENSEEUG00000006286
9669 Mustela putorius furo ENSMPUG00000005753 9978 Ochotona princeps ENSOPRG00000005002