Basic Information
Gene ID ENSMGAG00000016381
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Meleagris gallopavo [9103]

Cross Reference
UniProt G3UPQ1 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 185 253 1.50e-26 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 25 93 1.60e-25 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 348 418 2.40e-24 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 455 511 1.90e-06 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 516 580 1.10e-20 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Gene3D G3DSA:2.40.50.140 IPR012340 675 739 1.00e-20 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 Pfam PF00313 IPR002059 186 247 1.90e-16 Cold-shock protein, DNA-binding
ENSMGAP00000017554 Pfam PF00313 IPR002059 27 89 1.10e-14 Cold-shock protein, DNA-binding
ENSMGAP00000017554 Pfam PF00313 IPR002059 351 411 3.50e-09 Cold-shock protein, DNA-binding
ENSMGAP00000017554 Pfam PF00313 IPR002059 519 579 1.20e-13 Cold-shock protein, DNA-binding
ENSMGAP00000017554 Pfam PF00313 IPR002059 673 735 3.90e-15 Cold-shock protein, DNA-binding
ENSMGAP00000017554 Pfam PF12901 IPR024642 754 785 5.30e-11 SUZ-C domain
ENSMGAP00000017554 ProSitePatterns PS00352 IPR019844 197 216 - Cold-shock conserved site
ENSMGAP00000017554 ProSitePatterns PS00352 IPR019844 360 379 - Cold-shock conserved site
ENSMGAP00000017554 ProSitePatterns PS00352 IPR019844 37 56 - Cold-shock conserved site
ENSMGAP00000017554 ProSitePatterns PS00352 IPR019844 528 547 - Cold-shock conserved site
ENSMGAP00000017554 SMART SM00357 IPR011129 187 248 3.60e-21 Cold shock protein
ENSMGAP00000017554 SMART SM00357 IPR011129 27 90 8.30e-19 Cold shock protein
ENSMGAP00000017554 SMART SM00357 IPR011129 350 413 9.80e-17 Cold shock protein
ENSMGAP00000017554 SMART SM00357 IPR011129 518 580 8.60e-16 Cold shock protein
ENSMGAP00000017554 SMART SM00357 IPR011129 673 736 1.10e-18 Cold shock protein
ENSMGAP00000017554 SUPERFAMILY SSF50249 IPR012340 17 93 0.00e-00 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 SUPERFAMILY SSF50249 IPR012340 181 253 0.00e-00 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 SUPERFAMILY SSF50249 IPR012340 335 417 0.00e-00 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 SUPERFAMILY SSF50249 IPR012340 514 580 0.00e-00 Nucleic acid-binding, OB-fold
ENSMGAP00000017554 SUPERFAMILY SSF50249 IPR012340 659 738 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMGAP00000017554 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSMGAP00000017554 PF14444 1.3e-14 S1-like S1-like
ENSMGAP00000017554 PF12901 2.3e-11 SUZ-C SUZ-C motif
ENSMGAP00000017554 PF11604 7.8e-07 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMGAP00000017554 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSMGAP00000017554 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSMGAP00000017554 GO:0005737 cellular_component cytoplasm
ENSMGAP00000017554 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSMGAP00000017554 GO:0003677 molecular_function DNA binding
ENSMGAP00000017554 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 7425 Nasonia vitripennis 100123206
61853 Nomascus leucogenys 100590871 400682 Amphimedon queenslandica 100631963
8128 Oreochromis niloticus 100701469 9597 Pan paniscus 100968628
39432 Saimiri boliviensis 101034862 59463 Myotis lucifugus 102429010
10090 Mus musculus 229663 7070 Tribolium castaneum 655517
9606 Homo sapiens 7812 9646 Ailuropoda melanoleuca ENSAMEG00000017129
9615 Canis familiaris ENSCAFG00000009618 9358 Choloepus hoffmanni ENSCHOG00000000918
7719 Ciona intestinalis ENSCING00000014465 9483 Callithrix jacchus ENSCJAG00000012565
51511 Ciona savignyi ENSCSAVG00000008100 10020 Dipodomys ordii ENSDORG00000011609
9796 Equus caballus ENSECAG00000020885 9365 Erinaceus europaeus ENSEEUG00000006286
9371 Echinops telfairi ENSETEG00000006280 9685 Felis catus ENSFCAG00000029266
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
8049 Gadus morhua ENSGMOG00000012731 9785 Loxodonta africana ENSLAFG00000007150
9315 Macropus eugenii ENSMEUG00000002677 34638 Metaseiulus occidentalis 100908518
9555 Papio anubis 101024024 9595 Gorilla gorilla 101146917
9361 Dasypus novemcinctus ENSDNOG00000010287 31033 Takifugu rubripes ENSTRUG00000007996
9669 Mustela putorius furo ENSMPUG00000005753 9258 Ornithorhynchus anatinus ENSOANG00000003346
9978 Ochotona princeps ENSOPRG00000005002 8090 Oryzias latipes ENSORLG00000000707
9813 Procavia capensis ENSPCAG00000014368 9601 Pongo abelii ENSPPYG00000000996
13735 Pelodiscus sinensis ENSPSIG00000003823 132908 Pteropus vampyrus ENSPVAG00000008225
42254 Sorex araneus ENSSARG00000000738 9823 Sus scrofa ENSSSCG00000006752
59729 Taeniopygia guttata ENSTGUG00000000972 99883 Tetraodon nigroviridis ENSTNIG00000010878
9478 Tarsius syrichta ENSTSYG00000003747 9739 Tursiops truncatus ENSTTRG00000015583
30538 Vicugna pacos ENSVPAG00000000749 8083 Xiphophorus maculatus ENSXMAG00000009080